Contig Data
morexGenes
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Map Locations of contig_20018 (3019 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_20018

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_29398 1 904 bp MLOC_29398.1 Available Available LOC_Os03g11614.1, FRAME:+2, EVALUE:4e-39, 13103.m01314 protein OsMADS1 - MADS-box family gene with MIKCc type-box, expressed





CDS Structure of MLOC_29398






Contig Sequence (3019 bp)

>contig_20018 3019 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCACACACACACACAAGAAAACTAGACTACTAAGAGGAGACACCCCATAAGC
CTTCCTTCTGCCTCCTCCCACAACCGATCTGGGACAAAACCCAACACAAGGGATGATGAA
TCATTCCACCAGGCCGAGTTGTTGGTCCAACTATCTTTATCCTGATTTTGGTTTCAAATT
TTGAAAACAATAATAGCTTTTGAATCACGTGTAACAAAGATACAGATAAAAGTGGGGTGA
TGTAGTCAACCTTGGTCTGCCGTACACGATAGAAGATGTAAAATACTTGTAGTCTAGCGA
GATGGGCCACACTATTTTTTTTTTTTTGAGGTTTGATCAATGCAAAGTTATGACGAGGAA
AACACTTATCTGCTACTTCTGAAATATAAGAAAGAAAGTTGACATATGAAATTTTATTGA
AGTTTTTTTTTACTCTTGTGGCATTGAGACTAACCTACAATGTTAACATGACAAAAGAAT
ATAAGGAGACCTCAAGAATGCACACAACAAAAATATGTCAACATAATAATACAAAAAGGA
CATCCTAACTAATTTCCATGTGTAGAGAACATCAACACGTAGCAACATTATATTCAGGTG
ATTGTCCATGGCTAGCTCAAGGCTGAACATTGCACTGTCTTGCAGTCTGTTGTTTTTTCA
ATTTTTCCAAGCTTCCATTTGGTGGGACGACATTGTTTTCTTGAACTATCTTTTTTAGTT
TGGCCAACATGGTTTGTCATGTTCATATACATTTTAGCTTCTCTTTCCCATGGCAAGTAT
TAAGTCACTTGAACTGACATGTACCATGCATTCTTTTGTTGTCGAGACTAGATAAATTAC
CATCAATATCTGAAGCTGAAGACCAAACTTGAATATCTTGAAAGTTCACAAAGGTAGTTT
CAAGAGATTAGGCTGGACGGTTACTGCTGTATATATATTGCAACTTTGTTCCACCTTATG
ATTCCTCGTTCTCATGTCATAGAAATATTCTGGGTGGGGATCTGGGCCCACTTGGCATGA
AGGAAATTGAGCAAATTGAGAACCAAATATATATATCCCTCAAGAATATCAGGACAAGAA
AGGTAGAGAACTTGAACGTTTCATTTATGTTATATAATCTCAGGTTCAGCAGCTTCAGAT
GTTTTTTCTATTATACATGTACTGCTTGAGTTAAATAAGATGTATTGGTTTTAATTGTCT
TAGTGAAAACATGTTAACTACAGAGCATCTCAATGATGTTGCATCCATTTTTGCTAGAAT
GTATCTGAACTTTTATCACATTTTCTTTCGAGGGTCAGTTTTTGAGAGAGGATTTTCTAC
TCTCTGGTGTAGTACACCCGGGTGAACAAGAAAAACAAAAAAACAAATATCAAACATGAT
CCAAACTTCTGACATTTTGTGAAATTAAACATGATCAAATGTTTTAGGTTCAACATTTCA
TCCATAATAACATTCGAAGAGCTCTCACAAAAACAAAAACAAAATCATGTACTCAATAGT
GCACAAAACACTGACCAGCGTTTTTTCGTAAGAGCTCTGGAATGTTAATTGTTTATGAAA
ATTTGCAAGAACCTCAAACATTCGATCATGTTTGAGGTCACAAAATTTCAGATTTTTTGA
ATCACGTTTGATATGTGTTTTCCCGTTGTTTTGTTCACTCCGGTGTAGTACACCCGAGCA
TAGCCACACCTTTCCATTTTCTATAGCATTAGCTGAAACATATATCACAGATCTGTCGCG
TATTTTTGCAGCATAAAGTATTACTTGATGAGCTATTTGACCTGAAAAGTAAGGTAATGA
TGAATCATGAACTTTAGATAATCCTCACCCTAATATTGCATATGCTCCTTCTGGTAATAT
ATGTAATGCATGGCTGGCAAAATGACGTTCTGCAGGAGCAAGAATTGCAGGATCAAAACA
AAGACCTAAGGAAGAAGGTACAACCATGGAGCTTAGAACTTACACTTCCGTCCTGATATC
AAATTTTGGATCTTCCACTTTGTTGCCAAAACAAATTTTACGATGAAGTTTGTAAGCTAC
ACGTAATACAAAACTATATATTCATGCTAATCCAAAAAATTGAGTCAAATGTGGCCAAAT
AAATTTCTCATCAGTGTTTTCTTGTGAGTGCCAGTTGCAAGACATGAGCTGTGCCAAGAA
TGCTCTCCATAGGGCCTGGCAAGATGGAGGACAGAGTAGCTCAAATGGGAATGCCATTGA
TACTACTTATCCAGGATTTGCACAACACCCGGAAACGGAACATGATTCCATGCAACTTGG
GTACGTCATTCTACATGGCAATCAGTGTAACCTGCCAAATCTCTCCTAGGCATAAACTAT
TTTTTGCAGTATAGTACCCGAACAAGTCATCCATGACCTGTTCTTCCAATTTATAATTGC
ACAGAACATGAGTGTTCGGTCAGTTGAAGTGGTTTGTTTTCCTGTGTGAAGGTACAATAA
TCAGGCCTACATGGACCAGCCGAACAACAACGAAGGCATGACTTCTCAGCGCCTTGATGG
ACTTGGATCATCTGCAGGTTGGATATGATTGTTTAGGGCGACGAGACAGATAGGGTTCGC
GTATTGTACGTCCAATCTGGAGTCCAGAAACTCTGCATATGACGGATGTAGTCACTGGTC
TTTATATTCAGACCGCTGCTCATGGGACTTTTCCGAAGAATAAACTGGAGTCGAGTACAT
ATATGTACTGTAATGGCTTGTTCATCCACGGACATGGGAGTCGGGACATCACGTGGCCTG
GCGTTGCATCCCGTACGTAGCTAATATGTTTGGATTTGCGTGTCACTTGTTATATTTTGT
GTCGTGTGGTCATTACGAATACATTCCATATGTATGGACTAGCAAAAGGGCCCGAGCATT
GTAACGGAAGAAAAAAAATACCACACGCTTTTCTCTTCCTAATAATAAGGAAATCGTTAC
CTTTCAACCGACTGATCCTGCTCTCGTGTTCACCGTCTCCTTTGTTTGCCACATGGCCGG
ACGGACGAGCCGTGACCGT