Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
![](/morexGenes/blast_net_images/contig_199865_assembly3_WGSMorex_rbca.fasta-MorexXBarke_maploc.png) |
![](/morexGenes/blast_net_images/contig_199865_assembly3_WGSMorex_rbca.fasta-OregonWolfe_maploc.png) |
No map location |
Predicted Genes from contig_199865
Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
---|
MLOC_29366 |
1 |
404 bp |
None |
Available |
Available |
LOC_Os01g56130.1, FRAME:+1, EVALUE:2e-50, 13101.m05931 protein CSLC1 - cellulose synthase-like family C, expressed |
CDS Structure of MLOC_29366
Contig Sequence (2755 bp)
>contig_199865 2755 assembly3_WGSMorex_rbca.fasta
GAGCTAACATGCCACCTAGGAACAAGATAATTTACCATATCAACACTAAGTGGCAATACC
TCAAATATACGCATTTTCTAGGATTGTAATATGCACATAGCATATTACTCCCCCATAATG
TCATAACCCAACATTTATTGACAAGTGGTAAATGAAAACCAAGAAGACATAATTAATGGA
TCATTTTAGAATTTGAATTTCTCATGAGTAGGACGTACCACATAGAGACAAGATAAACTT
GTAATATCAATACTAACTGATATTACTCATGTATACACATTTATAGGATTGTGAGGTGCG
CAGAGCACATCACTCCCCCACAATGGGATAATCCATTAATCTCTAAAAAGAGCCAACAAA
TATACAAATAAGATGCAAAGAGGCTCCATACAAGACTCACATGTACATGATGTGCAAACC
AATATACACATACTCGATTACTCAAAATAAGCAAGTTCACTACAAGAAATATGATTGTTT
ATGACAAAAAATATTGATGGCGATTTAATTGGTCATAGATCAATGACAAAATTTCAGAAT
TTGGTCAGGGCAAGCGTTGTAGGGCCCAAACTCTATAGTATTATGACAATTTGGGTCCAT
AAGGTCATAATTTCTTTACCCACAATGGACATTGACATGTCTAGCACTATTCATGATGTT
AATTCCTATGTGTCAATTTTTTCCTACGTGTCAATTTTGCTATGTGTCAACCACAATTGC
GGGTGGGACGAGCCTATCATTCAAACCTAATAATCTAGAAAATCGATGGACCCATTATAA
GATTTGGGTCTCGAAGGCTTTGTTGTGGGACCCATGTGCCCTATGGACTTACTTACCGAG
CTAACCTGTGGAACCAACACCATGTCAAGTGTGTTGACATGTGGGACCCACGTGGGAGAC
CCATGGCCTAATAAGAAAATAAGGATGATGAATGACCTCGGAATATGGAAGGGGGACTGT
CTAAACGATAAATTTCAAGGTAAGGATTGAAAATTAGTTTTTAGCATGTATGTATGCAAG
ACATATTAGATAAATTCCAAATGAATTATGAAAAGGCCAAGATTACTCGCTTTGATGAAT
AAAAGAAGAAAATAAAATAGGCGTGCACAAGCTAATTTCATAATTTTTAAAATGTTTTTA
GATTTTAGAAAAATAAAAGACACTAAGATGTATCGAGATGTTTAAATGATACCAAGAAAT
GATTCAAATTAGTTATATATTATCCAGATATGAGATAAAAGTTATATACTGAACTATGAT
TTTTTTTGTTTCTTCACATGATTTGTGATAGATGTACTTCAAAATTTAATTATATCTAAA
TAAAATCATTTAATGTCATATATATCGTAGTATGTTCTATGATTTTTTTTAAATAGTATC
GATGAAATATTTTTTTCAAAGGTACTAAGGAATGTACCTTACCTTGGTGTTTGCGAAAAT
AAAGAACACATTATATTACAGAACAAGATTTAATATGAAGATGTATTCGTTAATTCTAAT
GTTTATACATGATAAGATGGAAAACATAACATGCAAATTATTACAGTACACAAAAACATG
GGCCCATTATCAGCCAAATTGAAAAACCCGGCTTCTCTTGAACAAAACCAGAAAATGTAG
CATGCGATGGCCAAAATTTCAGAGAAAGAGGGCGGCATCGCGAAATTTTCCCCACCTGGA
TAAGCCTAAGTCCTCCACAGCGCTGCCACTCTCCCTGTTGTCTCTCATATCCAATCGAGT
CCCACCACCGCTATCCTCTCCCATCGTTGTATCAAAGCTCCTAGCCATCGCTGCCACTAG
GTTATCCCCATCCTTCCTTTGTGCATCTGAGATGAGCGGTTGCCGGTGCTCGCGCCGTAG
GAGAGGAAGTCGTCCCGTCACCGGCTCGTGCCACTGTGCGTGACGTCTCCTCCTTGGCAC
TTGGTATCTACTGGATATGTCTTGATTCCTGCGATGACGTGTATTCCAGCACTCCTCTCG
CCCCAGTACGCCTGCGGAACCCTGCCCAGGCGACGGGTCACCTGCTGGACATCTTCGATC
TTTGGCGCCACCAAGCAGTATTGATCCTTGGCAAGGTAGGCTTCATTTTAAGCAATCCTG
AAGCTGGGAATATGGATTGATCTGTGCAACTGTGATGGATTTTGAATCAAATTTTAGATC
ATTCCTTTGATTTGGATGCGTGTTTGTAGGTGTATCAACAATCCATTGGAGCTGTGTGCA
ACTTGGACTGTCCGAGATGGAATTTCTTGGTGCAGGTGCTTAATGATTCTGATGACGCTG
CGACTTAAGCTCTCATCAGAGAGGAGGTTGAGAAATGGCAACGGGAGGGTGTCCAGATAT
TGTACTGACACCGGGTGATCCGTGATGGCTACAAGGCTGGAAATCTCAAGTCTGCCATGA
ACTGCAGCTACGTGAAAGATTCTGAATTTGTTGTTATCTTTGATGCCGATTTCCATACAC
AAGAAGATTTTCTAAAGCGAATTGTGCCTCATTTGAAGGTGACCACGCCTCTTGCAGCTC
CGTCTGTTCCATCCTCACTGTCGTCATTTTCTTTCTGTTCAACATCGTTCAGTCTGTTTA
TTTTATTTCTGAACGCTGTCGATTGATGAAGGTGTTTGTCACTTCTAAATATTTGTATGA
ATATTCCAAATCTGCTGCTAAGTATGAACTAAAATCTGTTGTTCTGAAGGTGCCAGCGTT
GGTGAAGGAATTTGTCAATGCTAGACTTTGTAGTAAGCCAGATTTGCTGCTATGT