Contig Data
morexGenes
Links



Map Locations of contig_197876 (2275 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_197876

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_29144 1 167 bp None Available Available None
MLOC_29143 3 912 bp MLOC_29143.1 Available Available LOC_Os02g02620.1, FRAME:+1, EVALUE:4e-50, 13102.m00207 protein sialyltransferase family domain containing protein, expressed





CDS Structure of MLOC_29144






CDS Structure of MLOC_29143






Contig Sequence (2275 bp)

>contig_197876 2275 assembly3_WGSMorex_rbca.fasta
TTCCTGCAGTTATGAGTGGTGTTTCTATAAATTGCAGGAATGGCGTGGCAGTAAAAATGT
TTATAAACACCAAGGGTTTCATAAGTTAGCTTGAAAAATCAATGCACATTGTCATAACTA
AAGAAGCAAGACCTTGGATTTGAAGTTGCATATTTATGGAGTGCAAGGATCGGACCAAGC
ATAGCTCTGTGATTTTACTATACACTTTTCTGCCAACTATGCCAGCTAGAAAACTGAGAG
TTGCAGCACATAAGGTATATTTTCATTAGATTGATTTTCCAGTGGTGTGACGTGGCAAGG
AGGGGAGGATGAACATGCCTTTTTCAACACATGGGTGGGGACAAACAGCGACGGGACTTT
CCAAATCTGGCGGCCGCTGTAGCTGCCTGTATAGCACGCGGGCGCTGCGTAGCAGCGTCT
AGTTTCCCAAATGGTGCCACCAAGGACGCCGTCCGTGCCTCGGCGGCTTCTGCCGCCACC
AAGGACGCCGTCCTCAGGCCCTTCCGTGAGAACCGTGCTCTCAAGGAATCGCTCTCCACC
TTGACACCTTCCGTGCAGTAATAAATTTACATTGCTTTGATAGACTCTGATGATAGATGT
GGCACTGTGTTGTATCTGTCACTAGTTCTGATAGATGTGGTAGCGTTTTATCTTCATACT
GCATGGATAGTGCAAGTTTAGAAGTCATCTCTGGGTTTCAAGCGTAGATCAATAGAAATT
TCATTGCTTTGATACGATGGAATGTGCCTGCTAGACTCTGATGATAGTTATTGGCCTTTT
GCACCTGCAGATCATTTCGGGTCTTCAGAATTTCGACAGGTCCAATGTTGCATCTGTCAT
CATGGCCGCAGATAAGGTGTGGATGTTGTTTGGTGCACTCATTTTCCATGCTCTGTTTTC
TTTTTTTGTACAGCTTAGCTCTTGTAGATGGGTGAAATGTTACCCTTTGAACTTTTTCTG
GGATAAAAGCTGGTCGCTTTGCAGACATTTTTGTATGTACCTTCCCGTCGCCGTCGCGGG
GCGTTCTTGGCTCCGATCGCTTGCCGGCTCCGGGTGGGTAGTTGATAGTGCCGTGCCATG
CTGCTGGCCCGTTGCATGCTGATGGCGAGTGGGGGAAGGGGAAGCGGCTTAGAGTGACAG
TGACACGCGGCACAGAAATTTGGATGCGAGTGCTGAAATTCTGAAAAACCTTGCTTCGAA
ATTCAGAGACGCCAGCTGAAGGCAAGCGTGGTCATGAGTTAAAGAACCACTTGGAGATGT
CTGGTTGCCTCTTGTTGTGTGTTTCAGCGCTCTACTCCCATGCTATATGTGCCGTGTTCA
CGAACTTTTAGTTCAATTTTTAGCATTTATATTATCATTCATTACATAGTTCCTGTTATT
TTAAAGTGATATGAACCTGCTGTTGTGTTGTTGGAGTCCTAACAAATAGTCAGATCCACG
GGCTCGGTTTAGGCTAATTGCCTGACCATTCATCAGATGCCTGGCAACTGTTCTTTAATT
TAATTTTGTACCTGGCAACTGTTCTACATAGACAAGGGTGGACCACGGGCATCTGTTGTT
CCTCTCGTAGTTAGACCAGCTTGTCTTATTGTTGTGATTATTGTCTTAGCTCTTATGGCT
GGTGCTTGCAGAAAGATCCAATAACTGGAGAGTCTGAAGGGCTGGCATTTGAGTTCAATC
TCTGCGAAGATGTGGCCTCATGGGAGCAGGTGTGCATTTTACGTACTGTACATACTTATC
TGTGTGGTTTATATTAATTCACTGAAAATCGGGAAGACATCGTTAAGTGATGCGTTGGCA
CTTGACATAATGTTGTTAGAGCAACACAGTACCTATTGATGTAGTGACTTAAGTTGTTTT
TTTTCTAGGTTCGCAACAGTACCACAATACTCACAAAAGAGTACATTGATGCATTACAAA
ATGGCTGGGAGGAGTATGCATGGCGCAGGATCAACAAAGGAATCCTTCTGTAGGTAGACA
CAAGTTTCACAGTTTCACACAGACTTGCATTATGGTTCAATTCTACAGATTGTTGAATAT
GTTTAGTTTTGGGTTTGCAGGAATAAGTGCAGGAACAGAACTCTTTGCATGGCGAAGATT
TTATTGGTTCTCCCTGACACATCACCATATATACCTCAGCAATTTGGTAGTTGTGTCGTT
GTTGGTCACTGCCCTATAGATTTGGGTTGTATCGTTGTGTATTATATTTGCTATGGAGCT
ATGTATGTATGGATGCTATGGAACTATATGTATATATGGATGCTATGGAATTTTG