Contig Data
morexGenes
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Map Locations of contig_196730 (1205 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_196730

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_29022 1 391 bp MLOC_29022.1 Available Available LOC_Os05g39960.1, FRAME:+3, EVALUE:1e-16, 13105.m04213 protein 40S ribosomal protein S26, putative, expressed





CDS Structure of MLOC_29022






Contig Sequence (1205 bp)

>contig_196730 1205 assembly3_WGSMorex_rbca.fasta
AACCTGAATGTTTGCATTAAAGAATAGTGAGCTCTACTGCCCACTGCGATTTCTTTGTAT
TAAAGAAAAAAAATCAGTACTTTTATCTCGCTGGAACTATGATGTTCATACATCTATGAG
TATGTTCAGTTTATTTTGTCCGAGTCCTTCTCTAGCCAACAATTTATGCTAGTCAATTTG
TGCGTGTTGCTTATGTGTGATATAGTATCTCATAGTTGGTTCTTATTCTGTACATGACAG
GGTTATCAAGCTTTTCTTGGTTAGGAACATCGTGTAGCAGGCTGCTGTGAGAGATGTGCA
GGAAGCTTGTGTGCATGATGGTACCATATCTCTCGTTCATCATTACACTCGTGATCAATT
ACAAGCTACTGTGTACTGAAAATGCCACTGAACTATGCTTTCTTTCCACAGGATATGTTC
TCAACCATAACTGTACGCCAAGGTGCACCACTGTGTTTCTTGTGCCATCCATGCCCACAT
TGTCGGTGTCCACTCCTGTGAGAACAGGAGGAGCCATGAGCATTTGCAGCGTTTCTGGCG
CAGGGTATGACCTTAACAACCATTTGTTCTTCACTTGCGACTAAGTTTAAGTTTTTCTTG
TGTGTTGTTCCATAACTGTTACAAGTTTAAAGTTGATGATTAGTTCATCACTGTCCCGTT
GTCGCTTTTGGCGTTACATTCACTATGTATATCTCACAATGGATTTGTCAACGGAAGCAT
AAGTAAATATGTCTTGGTGCATTGCTGGCGTATGTGTGACGATTGATCCCCGATTCAGTT
ATAGCTTCCTCAATGCACTCATGTGAAGTAAATGTCTTAGTGTTGCTTTTGGTGTTGCAT
TCTCAGTGCACAACAAATGCATCAATGGAATAATAAACAAACAATCTTCTTAGCATTGTA
GTCTTATTTGTGATGGTTGGTCCTTGATACGTCTCAAACGTANNTATAATTTTTAATGGT
TTCATATTGTTATCTTGTCATATTTGGATGTTTTATATATCTTTTATATCTTTTTTGAGA
TTAACTTATTAATTCAGTGCCAAGNNNNNNNTCCTGTTTTTTCTGTGTTTTTAGCTCATT
TCAGATCTGATTTTGGACGGAGTTCAAACAGAATAAAATCCCCGAAATATTTTTTTCCCG
AACGAAAGAAGATCAGGTGGCTTGTGGGTCCACAAGCCCCCTAGCCGCCACTAGGGGGCG
GCGGC