Contig Data
morexGenes
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Map Locations of contig_1956648 (1092 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1956648

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28883 1 790 bp MLOC_28883.1 Available Available LOC_Os02g13130.1, FRAME:+3, EVALUE:3e-11, 13102.m01454 protein KH domain-containing protein, putative, expressed





CDS Structure of MLOC_28883






Contig Sequence (1092 bp)

>contig_1956648 1092 assembly3_WGSMorex_rbca.fasta
ACACGTGAGAGGGGGTGTTACAGTATATGTGGATTGCACTAGCCCTTTCCATTAGTTCAG
ACTTTTAGTTACGTTGGCTAGTGCATGAAGCTTAACATGCATCACCAATGTTACTTGAGA
ATCTTGCTCTGTGAGTTGATCCCTCCATTTTTCTTGGTGGTTCTGGAATTACTGTATATT
ACATTGTTTTGTCTTTGGATATGTTTTGTCTGGTTTGCACTTGTTCTGCATGGTACATTG
TATGTTGTGTTCTATACCTATTCTGATGTGCAAACTATATTTTTGCAGAATCGCGCCTGA
AATCCAACAGGGCTACCACCCTCTCTGCCCTTGGGCAAACTGGGCTGCGCCTGATGCAAC
AGCAACACAACATATTTACATGCAGCCTGGAGCTTATCCTGGTGTACCACCATAGTATGG
CCAGCAACCTTTTGGCACAGCAGCCCCCCTTGGTACTGGCTATGACTACTATAACCTACA
GCAGCAATCCCAACAGCAAGTCTGCCACTGGAACTGCCGCGCCTGCTGATGTTAGCAGGT
ACAATTACATCCAGCCTGCTACTCATGCTTCACAAGGGTATGGTACCACACCGAGCTAGG
GTGGTCCAGGCGGTGCTGGTCAAGCATCTTCAGGGCAGCAAGCTTCAACTCCAGCCACTG
GAGGCCAACTAGGTTATCCTAATCAACCACCTATACTAGTGCTGCTGCATCAAGCTAAAC
GGCGCAAGGTTTTGCCTCTCAATATGGATACGTTGCTCCACAGACACAGCCTGGCTATGA
TATGCAGCCACCACCACTGGGCACGTATGGCCAGGGTGCTTATGGGTAGCCTCCGCATGC
TCAGAAGCCGCCTTCATCTGCTCCGTATGGACAGGCACGCCTACTCAGGCTGGTTATGGG
CAGTATGGATACAGTCAGCCAGGCTATGGGCAGTAGCAGTCATACTGTGATTGTTATGCT
ATTGGCAGCCTGCAGCATATTCTACTGAAGTTACAACACCTGTTGCGTCCCAGGATCAAT
CCACCACCGGACCTGCACCTACCACAACAACTGCCATTCCTGCTCCTGCTAATAGTGCCC
CCCCCCCCCCCC