Contig Data
morexGenes
Links



Map Locations of contig_195484 (4116 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_195484

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28868 3 1524 bp MLOC_28868.3 Available Available LOC_Os07g06570.1, FRAME:-2, EVALUE:2e-143, 13107.m00625 protein receptor protein kinase CRINKLY4 precursor, putative, expressed





CDS Structure of MLOC_28868






Contig Sequence (4116 bp)

>contig_195484 4116 assembly3_WGSMorex_rbca.fasta
CGCGGAACGGACACCACGCGCCTTCTCGGTGTCCGCCGCGTCCCCACCTGGCGGTCGTCC
AACTGTCCGCGGCCTACCTGGTCAGCTTAATTTATGACCTCGGGCCCACGCGTCTGCGAC
GGCGGTCGTCCCTTATTAAGCCGACCGTGCGGCGGGCCGTTCTGATCCGCTTCCAGCCAG
CCCTTGTCCCCATCTAGCAACACTCGCTCCCTCATCGCCGGCAAACCCTAGCCACCCCAG
CCGTGCCAGATGGAGCTCTTCTCCGACGCCGACAGCAAGAAGGCCAAGAGCAAGTCCCCC
GCCATTCCTTTTCCCTCGGAGTTCCTCCCGCCTCTGTCGGCGCCAGCTCGCCGGCCGGGG
CAACGTGTCAACGTGTGAGTGCACCAGGCGGAGTGGCACTAGCAGCACCGCGTGCCTCCC
CTGTACCCCGACGCCACCCTTCCGCACGACGAAGCACCTGGATCTGGAGAGGATCCCAGT
GTCGGCGGTGCCGCGGTCGGCTAGGGCGCACGCGGAGGAGACGTGGCACCGACGGACGCT
CCTGACGCTGGAGCAGCGTCGCGACCCGCCTACACAACCGACTCGCCCAACTGGGCTCGC
AAGTTCGCCTTGGAGTACGAGGAGGCGAGGCGACGCGGGATTCGCGAGGTCGACCGCACC
GTGCCATCGCCCTCGCTCGTCGTCCGCGAGGAGGACCAGGCGGCCCTTGCGGCGGTCTAC
CGGGAGAGCGAGGAGGACGAGCGGCGCAGGGCGACGACGGCCGAGCAATAGGAGGCGACG
TACGAGGTGGCCATGGCGCATGCCATGGCCCTCTCCGCAGCGGGCGGCAGCGTCCTGCCG
CCGGTGACCCCGCCGTCCCTCTCAAAGCCAAGCCGGAGCCATCGCCCATCGAGCGCTACT
CCTGGACGGGAGTAGTGCACGAGTGGTTCAGCGCGCCACCGGTCTGGGTTGAGGCCACGC
TGGCACAGGAGGCGGCGTCCCTCGAACGTTGGCGCTAGCGACGGTTGGCCGAGGAGCGCC
GCCATGGCGAGTACCTCGAGATGGTCGAGCGCAACGACGAGGAGGAGCAACGCGAAGCTG
AGGAGGAGGCGCGCCAGGCCGCGACGGCACAGGCGACGGCACAGCCCACGCCCGACATGA
ACGTCCTCTGGAACACGACGTTTCCATGGGCCAGCCCTGCGCCGACATTCATCGAACTCA
CGGACCCCGAGGACGACGCCACCATCGTCTAGGATAGCCCGCCGTCTCGTAGTTTAGTTT
GTTTTTTAATTTTTTTAAATGCAAATGTGAACACGTGGCTCGTGGTCGGTTTTAATATTT
AATTAATGTTGTTTTTATTTTAAATATACATGCTTTTTTTTTTCTTGCGCCGTTAAAATA
TGTCGGGTCAGCATTAGAACATACGTCGACCCGAACATGAAAGCGGACGTTCGTCTCCGC
CTAGCCGACACAAACGGACAAAATCACCGTCCAAAATCGCCGTCCGTCGTTGGAGTTGCT
CTTATATTCAGGGATTTTTAATGTATGGAGACTTCTTGACCACCGAGGGTCATACTACAA
TATCTCTGTGTGGACGTACAGTACAAAGAGTGCATTCACCCGCAAAGGACAAAACAAAGA
GCTACGTACACAAGATTACTTTCATATTTTTTTGTCATCCAGCTTCCCCTGCAAGTAGCG
GAGTACCTGTGGGATCAAGACCACGGCGGTGCCGCTGCCAGGCCTAGTGCAGAGCCTCGC
GACTATCACGAGGTCCCGGAGCTCCCCGGCGTCGTATGTGCCGCCGAGATCCGCGTCCAC
CATCCTCTGCATGGATCCGGCGAACCCTGGCTCCTGCACCCACCGCACGAGCTCCCCGTT
GCCGCCCCCGGGCGACTGTCCGGTCACGAGCTCCAGGAGCAACACGCCGTACTGGAACAC
CAGCTCCGCCCGCCTCTGCTGAATTCGCTCTGAAGAAAGAACACGCAGGCTCTAGTTTCA
GTGCCAGTGACAGTGCCATGCCAGACGTGTCAGACAAAGCGATGAAAAAAAGTGGCCAAG
AGAACCTTCGGCGTGGGATTCTTCCGAAGTGTCGTGACCGACGACACTGACGTCCGAGAG
CTGAAAGTGAGTACAAATTCAGTTGCTCGACCGATCTATTGGCGGTCCGGGATACATAGC
GTCGCCTGGAACGTACCAATGTGACTCACCTTGGCAACGAAATCAGCATCCATCATCACG
TTGCTCGAGTTCACCGTCACGTGGAACACCGGTGGGTCACAGAAGTAGTAGAGATACTCC
TGAATCGACTCAAAATCAATCAAGAAAATAAATGGTGTTATCGTTCCTGTGTCAAGTTTT
CAAGTGTTGTGGAATGTAGCAGTGGTCGTTATCAGGATTACCAGGGCTGCTGCCACATCT
ATGGCAACCTGCAACCGGGTCCTCCAGTTGAGTGGCGTCCTAAGTGGATCTGTTCCAACA
GGATGCATCAGCTAAGCTGAATTGAAGAGCACAAGAGATATCCCTCCCTCAAGAATTTAT
TACCGTGGAGGCATTCTTTCAGGCTCCTGTTCTCCATCTGATCAAACACTAGAAACCTGA
AACACGAAACGGAAGAGCAGCAAGCAAGATTAGGATAAGAGAAAAATACATACAGTGCAT
TATAAAAACGACGCGGTGGCGGTAGGTGAACCTGGTGTGTCCTTCTGAGAAGCCGCGGAG
CCTGACGACGTGTCGGTGGTTGAGGCGGCCGAGCAGCTGCAGCTCCCGGTAGAAGTGATC
TTCCTGGCCCGGGTCGCCGCCGCCCGCACGGCGCACCGTCGCGACGAGGCCATCAGCGAA
GCGGGCGCGGTACGCCGTGCCGCGAGGCCCGCCTGTCTCGAGGGCCGTGCTGAAGCCGCT
GGTGGCCGCCTCGATCTCCCTCGGCTTGAACCTCCTCACGAACGGCAGAGCACCTGATTT
TCCGAAAGCAAATCCAACTAATCTTGCTCACACGAAACAAGAAATTCCCAAGGGAAAAGG
GGCAGTGAAGCTCGGAGAAGGAAGGAAGAGGCCGTACGCGTGCGGCCGAGCCGCTGGTGG
AGGCAGCCCATCCGTCTGGAGAGGTCGACAGAGGCAGAGGCAGACGGCGCCCCGGGATTG
GTGCGCTTATTTGTTTGAGACCGGAGGAGACAGGTAGGCAGCAGGCGGATGGTGAGGTGA
GATTCACAGAGCAGGGAGGCCTCGGTTTTCTTTGCCCTTGTTTATCGAGATCTTCATGTT
CCGCAACACCGAACTCGAGCGAGCGTTGTAGCGGATCATGCACAGATATAAAAAGTAAAT
TAACACCGAACTCGAGCGAGCGTTGTAGCGGATCATGCACAGATATAAAAAGTAAATTAA
TAGAGATATAGAGAAGAGTCTTTCATTATTAATCATTGATCAACTCATTCTGCATAAGGG
AGCTCTCTTTTTTATATAGCTAAGGGATGGGGAATATGTGCCTACTTTGCCGTTAAGTTG
AGGGGAGCGAATGACCTATTTCACATAGAGTCTAAGAGGGTGTTTGGTTACACGGACTTA
TTAAAGACTTAGAACTTACCTTTAATTCTCATCTAAATTAAACAAGAGAGACTTATATAG
ACTTAAATGGGCATTTGAGACTTATGAAATAGGGATTTATAGTTGTAATATGGTCTTTTA
GTCCATGTTAAGTCCTAGGAACCAAACAGGTAAGAACTTTTTAGGGACTTAGGACTTATA
AGTTGGGACTAAAAAATTCTAAGACTTATGAATCAAACAGGGCCTAAGTTTCCCAACACT
TTCCCTTGGGCAGTTATCCGTATATTCATGTCTCAAAACTTCGAAAAACCTAGTGGGAAA
ATATATGAAGAAAAAGCGCATAGTATACATTATTGTATTACACGAATTGCCTCGTCAAAA
ACCTTAGGTGAGAAACATCACGAAAACTCACTCAAGGGGAAAATAGTACAATTAACTCAA
CCATCAGCTTGAGTACTCAATCATCGGGATCGAGATTTTAGCGACGAGTTTGTGAAGTTT
CTACCCCTAAATCTGTTGGAATTATGCCCTAGNNNNNNNNNNNNNTATAGTTATTATTAT
AATTCCTGTACTAAGATAATCGTTTATTATCCATGC