Contig Data
morexGenes
Links



Map Locations of contig_195426 (2862 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_195426

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28859 2 842 bp MLOC_28859.1 Available Available LOC_Os02g15710.1, FRAME:+1, EVALUE:4e-44, 13102.m01752 protein plastocyanin-like domain containing protein, putative





CDS Structure of MLOC_28859






Contig Sequence (2862 bp)

>contig_195426 2862 assembly3_WGSMorex_rbca.fasta
TAAAGCTTATAAATATTCTTTGGGTCCCCTTGTGTCGAATCAGTAAATTGGCTTTTACCC
GCGAAGACTGTTGCGATCCCCTACATTTGTGGGTTATCATAGGTGAATTCCTCATTTGCG
CCCATATTGGTACTTTTAGACTCATATCGTCAGTTTGGGGTAGTCAAAGAGTTTTCATAC
TAGGCTCCCCTCTGAAGTTTCCATCTTCGTTCCAAGTGGTAGCACCTTATTAGTTAGTCT
TATAAATTTCCCTCTAATTTTGGTTCTCTCACATCTCACCGAACTTACACCTTTGTTAAA
CTAGTCTAAATTATTATACAAACCAAAGGCATTGAAATTTCTGAAGTCATGCCAAATTCA
CAAATACTCCACTTATTGAAAATTTGTTGTTAATTTTAACTGATTTGACTAGACAATCGC
AAATCATGGCCTTCGATCATCCTTTAGCAGCTATGGTTTAAAAGTCCACTTTACTGACGT
CTCCATATTAAAAATGATTTTGTATTCCAAAATTTAGCTTATTTCAAATATATCATCTAA
TACTAGTATATATAAATATCTGATGCACAACAAATGCATCCAGGAATAAGAAATATTAAC
TATATCTTGAAAGTAGGGAAATAAATGCATCCATGTTCATTTCCATTAATACTAGATCTC
ATGATATAACTTGGAGGATTTGGTAGCATATACTAACTAATGTTCCAGATCATGATTGTT
GATTTTTCTCATTTAAAGGACGATTCTCATTATTTCAACACATTAAAACAATGATCTTAG
CTGGCCGCTTTAAAAGCCTATATATATCATACAAGACGGAGATCGAACACAAATCATCAG
TTGAGGAATCGACTATTGTTTCCTTTTGTTGTTCTTGTGATCTTCGGTTGTGAGAAGAAG
TCAAGGGAAACACGTTCAATGGCACGGGGAACCATCGTACCCACCCTTCTAGTGTTGCTT
CTGGCCGTTTGTTGTGCAACCTCCGTTGTGCATGGAAAAGAGTGGACCGTCGGTGATAAC
AAGGGATGGAGCTTCGGCGTCTCCGGTTGGGAGAATGGCAAGCGCATCCAGTCCGGCGAC
ATGCTTGGTAAGAGCTCTAAAGATCAAATGATTAGATATACTTGAAGTATATATATGAAT
GAATATATGTTTTGATCTGTATTCTTGTGTTAACTGATGCACATAGTGTTCAAGTACAAC
CCGAGTATGCACAACGTGGTGCAGGTGGGAGAAGGCGACTACAACTCATGTACGGTTTCT
GGCCCGTCGAGGGCGTACACCTCCGGCAATGACCACATCCAGCTTGCTCGCGGTGGCAAA
GCATTCTTCCTCTGCAGCGTTCCGGGCCACTGCCAGAAGGGCATGAAGATCGCTGTCACT
GCTTAATAGATCTCGCGCATATGTGTGTCTATGTATTTTTACTTCGTACCAAATCTTTAT
GGTGTACTAGCCCATGATAAATTGGTGATAGAAGAAATGGATTGTGTCTACATCATATTG
TCATGGAAACCAACAACTATTTGGACTAGCTATTGGAAATATACGAGTAGGAATAAGTGT
TTTCCATTATACAAACCATACTTTGAACATTAAGGGCAAACGTGTCTGAAGGTCTGTCAG
AGCCAATCGGATTCAGACTCTCATTTTTAATACTTCAGCAAAAATACAACGCATCCCAAA
CATACTAAAAATTACTTAGAGGTTCTTGGACGATCAAACGACTACTACCGCCGAAATGAG
ACGCTCCGCGGTGCAGGCTTGACCTTGTCGATTACATCCGAGAAATCTTCATGCACATGC
CCCTCGGGCCTAGTGCCCCAAAGCCCTAGTCGTCAAGTGATTTTAACAAACTAGACCCAC
AAATCTAGTAACATGGTCGAGCTTCACATATAGGATATCGTCTTGGTTGGGTCTTGTCGG
ATTAAGGGTAGGTTTTAGACTACTCCACTCCATGATTTCAATATAGTTGTTTCGAATACC
TTGGCTTCAATTTCTTAGTGGATTGGAGCTGGAGTAGCATCTAGTTCATTTTTACTGCAG
AGATAAATGGTTGCTTCGCCTCCTCCATATCACCCACCATACCCCTGTAGCCATCTTATT
AACAAACAATAAGATCATCTTTAGTCAAACTCTTATAATTTATCTCCTTATATGCCTTTC
TAAACTTAAATCCTTCGAAATTATGGAGTTAAATTGTGGCCCAACCTAACCAAAGCCTAT
ATTTAACTCCCTAAAATCTTTTCGATTATTCTTCTATCCTTTTTAACATACATTTCAAAC
AAATGCATGGTATTTCATCAATCATTTGCATGATTCAAATTGAACATGCACAACAAAACA
ACCATAAACATACATATATTTCATCCAATCAAATAATTCAAATTAAAACATGCAAATAGT
TCACGCAAAGGCCATCACATCGATAAAGTTTGATAACAAAAACACAACATTCCTTGTGTT
ACGTCGTGGACCAAGCCATATCCAATACTACTACACTAACTCAAGCACTTACGTGCACAT
CACCATCAAAGAGATCATTTCCAGTGGAACTTGCACGTGCGCTACAACTATGAATGAATC
GTACATGTCTTTTGTACCGTTGGGGATCGACGACAGGATACATAATCCATGATGTTATAA
TCTACCTTCAACGAAGTACTGCAGTGTCATTTATGTTTATTTGGAAATCTGAAAATCTGT
GGAAAATGGAATGGTTTCTACATTCAACAGAGTACTAGTAGCACTAGTGGGGACGGGGCC
TTTAGCCCCGGCCCGTAAGGAGCTTTAGTCCTGGTTCATCAACCGGGACTAAAGGGGCGN
GACTAAAGGCCTAACCTTTCGTCCCGGCCCTCTTACAAGACG