Contig Data
morexGenes
Links



Map Locations of contig_194849 (1371 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_194849

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28802 1 678 bp MLOC_28802.1 Available Available LOC_Os02g38300.2, FRAME:-2, EVALUE:3e-40, 13102.m04213 protein SNF7 domain containing protein, putative, expressed





CDS Structure of MLOC_28802






Contig Sequence (1371 bp)

>contig_194849 1371 assembly3_WGSMorex_rbca.fasta
AAACACATCATCAATATACCATAAAATTTATTACATGCAAATGAAACAGGCTAAACTCTA
AAAATGAAGCAACATGAGATCAAAACCTTTTGTTTTTTCTGTAGCTTCAGGCCTCTCTGG
CGCTTTAGTCGGTACATCAGGAAGCTCAATAACATCATCAATGTCTTCAGCTGGAGCTTC
AGTGTAAGCCGCTGCTTTAGGTTTCTTTTCAGGTTGTACTTCAGTAACGGGAGCATCCGG
CAGAGACTCAAGTGCAAGCTGAAAAGAACGGGTGACAATAAAAATTTAGCACAGAAAGAA
ATCTTCATTTAAACTCAGAACTCGAAGTTTATTATGTTGGTATTTTTCTTAAAACAAAAA
GCGGAAAACTGTTTGAAGCTTTCAGGGGAAAACCTCAGCTTCCAAGTTGTCGAATTCAGC
CATGACAGCCTCCTCATCCTCAGCAGATAGTTGTTCGCCCAGAGCGGCATTTATTTCCTG
CAATCAATATCAGTTGATAAGCGAAGTAAAAAGGTTACAGGCATTGTCATTAATGAGCTA
AGTAAAAAGTTTGCAAATGGTGAGGTCACAAGAAGTGACGAGAACTGGGTTCAAGTAATA
CAGTGTTCCCGTTTCGCTCCACTTCGTCATGCCTCCATCCCACGTTTCGCTTCACTTCGT
CGAGTCTACTTCCCACGTTGGTTTTCATCCACGCAATGCCCGCCGGTTTTCCTGGCCCCT
CCCCACTACCCCACCCGATTTTGCCCCGCAACAGAAAAAACTTGGAAACCAGATCACAGG
CAGATCGTTCTGTACATATCGTTCCACCCATGATTTCCTCCATCAACGCCATCACGCCTC
TCTATGCCACACCGTCGCCCAGCACGTAGCACCGCCACCTCGCACCGGAACGAAGCCAGT
CGCCACCCTTGGACATCGTTGGCTCGAGCACGCAAGTGTACAGGCACCTCTCGCATGGAC
ACTGTATGTTTGATTTCCCTTAATTAAGGACCCAACTACGCCGTAAGGCGGACGAGGCGG
TACGCTGGAGGCCGCTGCCTCCCGTTTGCCGCTACCGTGCCACATGCACAACAAAACAAG
CCACAAGGGAGCTTGAGCAGCTGGGGCAGCGACATCCTGTCTCATGTTTGAGGTGTGTTC
AATTCTTTATCCGCTGTTGCTAGGGCTGCTTATGCTGATGCTCCTGAACTTGTCTATTCT
CTAACGTGAATGAGGTTTTGTTTTCAGTTAGTGTAGTTGGGTCCTTAATTAAGGGAAAAC
AAACATGCTATTACAATATTGATCTTGACGCTATAATTGGCTTCCATCTCACATTTAAAC
AAAATCTTGGTCGATTTCCTATCTTGACGGATGGACGGCCACATGATCTTC