Contig Data
morexGenes
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Map Locations of contig_194848 (1582 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_194848

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28801 1 151 bp MLOC_28801.1 Available Available LOC_Os03g53950.1, FRAME:+3, EVALUE:4e-21, 13103.m05908 protein strictosidine synthase, putative, expressed





CDS Structure of MLOC_28801






Contig Sequence (1582 bp)

>contig_194848 1582 assembly3_WGSMorex_rbca.fasta
CCGACACCCAGCCCCACGCGGTCCCTCCTCTCGCCTCTCACCCACCCACCCAACGCCCCT
CCTCCCTCCGATCCGATCTGCGCGACGGGCCCGCTGCAGCTAGGCTCCATGGTGGACTTC
CCAGGCTTCGAGGCGCACCTGGTGGACCTCCCGGACACGGCGGAGATGCCCCAGCATGCG
GACGCGGGCGAGCGGCTGCGCGGCGCGGAGATCCGGTTCCGCGGCGAGGTGCAGGGCCCT
GAGAGCGTCGCCTTCGATGTGCGCGACCGCGGGCCGTACATGGGCTTCGTCGACGGTTGG
CTCCTCGTCTGGGACAGCACGCTGGGCCTACTTCGTGCACGCCTCGCCACCACCTCCCCA
AATCATATTCTGAGCTTTTACTGTACTTTGACACATACAGTTTCATCTTTTGCCGACGAG
CAGATCATGAAATAGAGTTCTTCTTCGTAATGCTAAGTTTCTGTATACTAAAAAAATTTG
GTAACTGAAGGACCCTCTAATTTTTGTGGAAAAGGAACTAAGCCTTGCAATTTTTGTGAT
TGCACTCATGCGACATATGTATGGATAAACCAAAGGATCTCGCGTTTGGATGTGGACATC
AGGTGCAGAAAATATCCCCTTGCTTTCCTCTAAACATTTATTCATAATTCTTGTTGTATA
TACAGATTGCTAACACGTTTAATTCATACTTGCTATGACTGCAGGAAAACATTGGTGCGC
TGCCCTATGTGCCAGCAGCACATAACCACCAGGCTGTACTGATTGAAATCCAACCACCTG
ATGCTTTTGAAGCATGTGGTGTGCCAATACGGAAGGAGCTCGGTGGAAAATGTTCAGAAT
TCCACACAAATTTTACTTGTTGTCCATAAATTTTAGCGTCCTTAATGTGGTCGGGGTGTC
TTCGATTAGCCAGTGATTTAAGGCCCTGTTGGAATGCAGCATTTATTCTCCATTTCCCAC
AAGGGAAATGTGGATTGAACCGTTTCGGTAAAATTTCTATGTTCCTGAAGGGCTCTTAAT
TACTGCAGTGAAGAATGTTCTGTGGAAAATAGTGTACATATTGCTTTCCTTTCTTTCTCT
TGTAAATAAAATGAACAGTCGAGAAAATTCAGGATGTACCAATTAGGAAGACATTTGCAT
TGTATATTAATTAAAACCTGTTATAACTGCTGAATATTCAGTTTTGTATCCATTGGGCTC
GCCGGGTTTCAGCACCGACCGGGTGCCTCCCAATACCACCACCAACTGCGGTGCCATCGA
CCCATCCTCCTACTCGGACGACGATGGCGAGGCGGAGGTCGACCCCAATGTGCACCCCGA
GGACGACGACACCACCGTTCTCCTCGATGAGGAGGAAGACGACGGGAAGACCTCTTCAAC
GACGACTACCTCAAGTAAGCGGGACACGTCCCAACTAGAGATTTTCCGGATCTGATGTTA
CATGGGACAACGTTTAGATAGATGTTTCTAGTACTTGACAAGTTTAGCCCGTTGGATCTG
CTAATAAATTGGTTATTCAACGACTTCGGGGGTTCGAGATTCTAGGAATTCCGGCCTAGA
TTTACTTCATAAATAGGCAGAT