Contig Data
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Map Locations of contig_1936490 (824 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1936490

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28641 1 275 bp MLOC_28641.1 Available Available LOC_Os09g01780.1, FRAME:-3, EVALUE:2e-15, 13109.m00093 protein transposon protein, putative, unclassified





CDS Structure of MLOC_28641






Contig Sequence (824 bp)

>contig_1936490 824 assembly3_WGSMorex_rbca.fasta
AAATCCCACAAAACAGCCTACAAAATATGACAAGTAGGGAAACAAGTGGGGGAACATGAC
AATTATGGAAAACAAAACGCAGCAAGCAGGATGTGTTTTTACCCTTAGTATATGGCAACA
GACGATCCCATCACGCTCGTACTTGCAACATTCACACATATAAAACCCTTCTTCAACATT
TGCATGAACCTTAAAGGACTTGTTGCCATATCCCGGGACAAACTTAGCAATGCAGTCAAC
CATGTATTCTTGGGCACCCATTTGCTTACAGCTGTAAGACAACAGCGACTGCATCTCCCC
CTAGAACCTAAGAAAAATATTGCGCGTATAGATACTTGACATTTGGAGCTCAATTGGGTT
GTAACTCCACTTCCTAGCTGTTGTGATTGTTGTGTATGCATCCTCCTTGCTCTCAGCACA
CATTATCTTCTCTTGTATGGCAGCATATTGGCGAATAAAGTCCATTATTGAGTTTTGTGG
GTTGACATAATTTTTGAGCACATCATTGAAGCCTTCACTCCTTTGTGTGGTTTGGAGAAA
GGGGTAGAACTTGTGCTTAAAGTAGGCAGGCACTCAACACCTTCGTTTCTCATACAAATA
AACAAAGTCTGGGTGTTCTGCAACCCCATGTTGTTGAACCATTGCAATCCACCTTGCTTC
AAATTCCTCAGGAGCGTAGGTGTCGTTGACACAATCATTGAACTCAGCTTGCAACTCTGG
TTGTTTCGCTAGGAACACACCAAGCTTCTCAGTTGCATTTTGCATTATGTGCCAACGACA
GTTTCGGTGCGTTGTATTGGAAAAAACATCCTGAATAGCAGACC