Contig Data
morexGenes
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Map Locations of contig_191453 (1680 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_191453

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28398 1 1116 bp MLOC_28398.1 Available Available LOC_Os01g64920.1, FRAME:+3, EVALUE:6e-91, 13101.m07004 protein nuclear matrix protein 1, putative, expressed





CDS Structure of MLOC_28398






Contig Sequence (1680 bp)

>contig_191453 1680 assembly3_WGSMorex_rbca.fasta
GATGCTGTTTTAACCTCGGTATTAGGGCATCTGATATATAAATTACCTGACAAATTGCTC
CCTGGTAGTGTTGATGAGCAGTTGGCAAAGGATGTACAACTTGTAGATTCCATTGCTGAG
AAACAGGCGCAAATTTTTTCAGAGGAGTGCAAGCTTTTTCCTGCAGATGTCCAAATACAA
TCAATTTACCCCCTGTAAGTGCAACCATTATATTCTTGTCATCAATTGTATTATTTAGAA
GTTTCAGAGTTATAGCACCCATATAATTCCTTAAATGGTTTGAATCTATGTTGCTGTCTT
GTGACTCCCAGTTGACAAGCAATTTCAAGAACCACCACCATTTCACTGAGTTAAATTATC
ATTTTGCAGGCCTGATATAGCAGAACTAGAGTTGAAGCTCTCTGAGTATACCAAAAAGAT
GTCAAATCTGCAACAGATGGTTCAGGAGCTAGCCTCAAAGGTATAAATTCAGCATTGGAT
CCTACTTCAGTATTCGTACAGCTGTGATTTGATCGTATATATAAAATAGACTTGTACACT
TTTAGCTGAAATTCCCGTGAATAGCATGTTTGTTAGTTTGTTGACTGTACTCTGCAGTAT
ACTATTTGTGCTAACAGTGTAGTCTCTGCTGTCCAGTATGACTATAATCCAAACGAAGAC
TATGCCGAGACAGAGTTGAAGTTGAGGGAACATTTGCAATCATTTCTTGAAACAGTTAAA
TCCTTCAATATGATATACACTAAGGTGAATATCTTATGCATCGTTATGTAATTTTCTCCC
TGTACCTCCTCTTTATATTCCAGACAAGCAACCTTGACATGAATATCATTTGTACTTCTG
ATTATCATTTTCCATGTGTTTTGAGATGTTAGTTGATAGAAGTTATTTGGCACTGTAGGA
AATTCATCCTTGGACCCACATGATGGAGGTGCCACAATTGCATGGGTTTGGTCCAGCTGC
TAACCGCTTGTTAGAGGCTTATAACACACTTTTAAAGGTACTATCTGAATTTTTCTATTC
GTTTATTGATCACTTTGTTGCTCATTTGAATTTCTTGTCTATCTCTGGCCTGCATCTCAT
GATCTGGTTATTTGAACTTTTGATTGGATGAAATAGTAAAAGTTCATTTGTTAGTAGGCA
TTCAGTATGTCATAATACTGTCATAGTTCTATGACATTTCTTTCAAGTTTCAATGCACTT
GTTATTATTATAGGCAAATTATTTTCCTGCAACATGAACTTAATGCACAGGACAGATGTT
TGTTTTTCCCTGTGAAAAACTCAAAAATAGTTTCCGTACTAAACCTTACTGGTGTTATTT
TTGAAATGCTGATGGCCGGCAATAATATCTTTTTAACTCTAGCCGACAGGAATTAAACAC
CCTGCTGCAAATTTAGAATCAAATCTGACTAGCTTCAAATATCTACAAGCCTGGAAGTTA
TGTTTAGTATAAGAAATACCAAATATCTGGCTAGCTCCTTGTATTCTGCTCTATGAAACA
TCTCCAAAATATTAGTATGAGATAACATGGTATGGCTTTATGTAGAATTACACAGTATCA
TCTACTGTGTAAGTGTTGACAGTTCATAGCTCTTATAATCCATGTCCTTTCAAGTAGTTA
GCATACTCTGGCTAAGTGTTGACAGTGTTAACCTTACTCATACAAACATGCTTTGACTTG