Contig Data
morexGenes
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Map Locations of contig_190838 (2851 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_190838

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28316 1 751 bp MLOC_28316.1 Available Available LOC_Os04g51270.2, FRAME:-2, EVALUE:9e-28, 13104.m05222 protein vacuolar ATPase G subunit, putative, expressed





CDS Structure of MLOC_28316






Contig Sequence (2851 bp)

>contig_190838 2851 assembly3_WGSMorex_rbca.fasta
GGAGTTGCCATGGAGTTTTGCCGAAGTCGTCGACGTTGCATTGGAACTCCGACAGTTGCG
ATGAAGCTTCATCAGACTCGTCGACGCTGCATTGGAGCTCCGCCAGTGCTGCAATGGAGC
TTGGTCGGAGCGTCGGTTTTGCTTTGAAGCTTCACCGAAGCTGCAATGGTGCTCGCCAGA
CTTAGACGCACTCAGTGCCGCAATGGAGCTGATACGGCCATCAACACACTAATCCAAAGG
CTGATTAGGCGGCGGACGATTTCTTAGAAAAATCATCCGGCTGATTCATAGCAGCCCCCC
TTGATATATAAGATTAAAACACTACCAATGAACTTTGGCAGATCCAATAGCCTATAGCTG
CATTACGATTTGAATCAGGATGCGTTTCCTGCATCCAACAACTTTCCAGCGTCTAAAATT
CATGCATTGAAAAGCTTTCAAGCATCTAAAGCACCCCATTGAAAAGCTTGCCAAAGTTCA
CCATGGATTTAAAACTTATTTACTCTTATGAATGATACATCTCACATAAAAAATACATAT
ACTGGTAGCCATACAAGGGAGAGACAAAAAGGGTTTAAATCGACAAAATTTACGAACTAA
TCACCAAAGGTTTAGCAAGTAGTATCAGACATGGCTGCTGCTCAACTGTAGCAGCTTATT
TCCAAGACAAAGAACAAGGAATTACAGCTGGAAGTGGCAAAAGCCATTTCTTATAACACC
TCCCAAAGAAATAAACAGATAGTACAAAGTTGTCATCATAATATGCAGGGCCGACTCATC
AACCTTTAGTTCTTCACAGTGGTGACGTGCCTCAGAAGCATCTGAATCACCTCTGGGGAG
ATGTTTGCTGCCTGCTGCTTGAGCTGTTCAATTTTTACGTTTGTCTCTTGCTCAAGGCGT
TTGACATTTGCACCAGAGTCACCGCTGGTCTGGAAGTGGAAATGACAAGAATATAAATGA
TCAGAAACTTTATAAACAAACAGATTGAATGGGCCGATGCACTATACAAGTGTACATACC
TCGGTGAGCTTTCTCTGGAAATCAGCCTCCATCTGCGCACGGTACTCAGCTATCTCTCTC
TCCGCCTCTTCTTTTGCTTTCCTAAGCCTTGCCGTTTTAGCTGCCAAAGACATCACATTT
CAGTTCATACACAAAAGTAGATACAAAGTACTTTAATTTCAGCTTCAAACTGACCAACAA
TATTGATTGAAGTTACAGATTTTGCCAATTTAACAACGCAATGAAAACACTTCACTTCCT
ATCAAGATATTCCTACCCGACAACAGAATTAGATGACACGGTCTATCAAGCAAGGAAGGC
AATATTACCAGGCAAAGATGTTACAGAGTGCTAACAACTATGCTCTGCGCTATAAACCAG
ATGATGACTTTGTAACAACTAACAATGGAACAACATGTATCACAACTCTAAAGTGTATTT
GAGTTAGTATGGCAGGCAAGACATAGCAAATACATTAGAAAATGACCTACAACGTGACAA
ATCCTACATTAGTCGGTAAACACATCGAAATATAGAAAATCCATTGTGGCAAACAGAGCA
GACCCACACAAACGGTCAATTCACAATGTTATCACTCCACAATGTTATGCTCAATACATA
ATTAATCAAGCCAAAAATAAGAGAACATTACCAGCCCTGGCAGCATTTACAATTTGCTGA
GCATCTTGCTCTGCAGCAAGCAATTGCTGGATTCCACTTGGGCGCCTGCTTGCGTCCATG
TTTGGGCTGCGGAATGAAGAAAAATAATCAGTGAAATGCAATCGGTATGCGATATTGTTA
ATTGGGAGATCTAAAACATAGAATGTCGCATAACATCCCAAAACTCGTACTCCACACGGT
TTTACAGACAAATATCAGATAATGTCAGATACGTGACTACCTGCAGTTTTACAGACAAAT
ATAGCTGGAATCAAAATCCCACAAATCTGCTGCTCCAGAGAATACCAAATATTAACAGTA
CCTCCACACGGTTGAGCTACAAAGCTGCCACAGAAGTAGTATTTCGCTTCAAGGACCCAG
CAATTGCCTGATTCCAGGACCCAGCTACCTTGGAATAGCAAGCTAATCGGGTTAATTTAC
CATACGCACCAACAAGCACTAGAGAATAGTTGGATCTACCCAGGCAGTTCTACACAAGCT
TACACGCGAGCTAGATGCCCACACATTACGGACCCCTACCCCAAACTGCAAATCCAGATC
AGATCAGCTAAGATCCAGCAACAGAGGCCAGCTACTTCATAAACCGGCGATCCCCGAACC
CCTTTGCTTATCCCCAATCTACCGGATCATCAAACAAACAGCGCCCAAATTGCATAGTCG
GAACGAACAGGATCGAATCGACGAAACGGCCGAGCATCAAGCGCGGCCGGTTCCGGCCCA
GATCCGCCCAGATCGACGCGACGGGAACAGAAATCAGCGGAGAATCCCGCTGCGGGGAGG
CGGATCGAGCTCGTACCTGACGGAGAGAGGCGACTCGAATCACGTGGAAGACGAGAAGGA
TCCGTGGGGAAAAGCTAATCCTCTGCTGCTCCTCTCGCCGTCGTGGCCCCGACCTTTCAA
GCCTCTCTATTTATTACTACCGCACAATTGTATCGTTGTCTTCTGCCATCCCGGGCCGGG
CCGGGCCGGGCCTGCCGTTTTCAGTCCAGTTTATGCTCTGGATCCACTCGCTTACGAATA
CGGCCCGTTAGCACCAAGGCCCAGAGGCGCGGGCAGCAAATAATAATATCTCTTCTCTTC
TGCGTGACCCCTGCTCCCAAACCCCCCAATCAAAACCCCATCCATTCCGGCTCCCACCTC
CTCCCTCCTCCTCCGCTCGTCTCCTTTCGCC