Contig Data
morexGenes
Links



Map Locations of contig_1905107 (882 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1905107

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28275 1 876 bp MLOC_28275.1 Available Available LOC_Os06g12780.1, FRAME:+2, EVALUE:3e-26, 13106.m01404 protein OsDegp10 - Putative Deg protease homologue, expressed





CDS Structure of MLOC_28275






Contig Sequence (882 bp)

>contig_1905107 882 assembly3_WGSMorex_rbca.fasta
AATGGACTCATTCTATGCATGTTCTAATAGATATTTGCAGGTACAATGTCGTTCAAAACA
TCTTGAGCCTGTGTGAACATAATATTCAAATGATAGCCTAAATTTCATAATAATTCATGT
CATCTTGCGACCCGTTCCTTTGGGACTCAAATAGAATAATGATATCTTTTTCTCTACAAT
AAGCACATCTATCCTGATTTTGCAATGCCAAGGTTGACTCAAACCCATTGACTAGTTGAG
ACTAGTCGATTTGCCAGGCTCGACTCATCATGAGTCGCTACCCCAGAACGACTCATCGAC
TCAAAAACCTTGATATGTTGTTTTTTCTCTCTTATAACCTCGTCAATCTTTTGATGGATG
GAGGGCTTGCTTTTGTTTTAAAAAAACGTCCTGTGCTAATTAGTTCTCTTGTATTTTTTT
GACATGTATAATCTTCTTTGTTTTGCATCCAACTAGCTGACCTTTTGCCTGCATTCTCCT
GCCAGGTTTCCCTATACTTGGGATAGAATCGCAGAAAATGCAAAATCCTGATCTCTGTAA
GGCAATGGGAAAGAAATCTGACCAAAAGGGTGTTCGTATCAGAAGAATTGAACCAACTGC
TCCTGAATCTAGATGCATGCAACCTTGTGATATTATTCTTAGCTTTGATGGTATTGAGAT
CGCCAATGATTTATAGCTTCTGTCATACTTTATACATGTATCTACGTATTATCATTCATT
CTTGTTCACTTCACGACACATGTTCAGTTCTAGCTATAGGTTATACTACTCATTCCAATG
AAGTACAAAGTGTTCGTTTTGAGTTGGGTCATCGAATGAAACTCTATTATGATAATAAAT
AATGTCATTCCTTCCGTGCATATTACACTATATATGGTCTAA