Contig Data
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Map Locations of contig_1899359 (1019 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1899359

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28197 1 592 bp MLOC_28197.1 Available Available LOC_Os10g02090.1, FRAME:-3, EVALUE:9e-15, 13110.m00108 protein retrotransposon protein, putative, unclassified
MLOC_28196 1 350 bp AK364738 Not available Available None





CDS Structure of MLOC_28197






CDS Structure of MLOC_28196






Contig Sequence (1019 bp)

>contig_1899359 1019 assembly3_WGSMorex_rbca.fasta
TAACAAAATGCGAACTTGTACTGTGGCTGTAGAAGCAGCGCTAGCAGCTGCAGCTGCTGC
TTGAGCTGCTGCAGCTGCTGCTTCTTTTGCCTTTTTAGAGGAACCGCCTTTCACAATAAG
TGGCATCCTTGGAGCCAATGCACTCTCGACCAAAGCATATCTGTCGCGACAGCTGTCCCA
TGCGAAAAGTTTTCCCGTGCCTGAATCAACAACTGACCAATCACTAGCTTTGTACACAAC
GAATGAAGGAATGTCTGGCCATACAACTGCAACATACCTGCATATAAGTAAATACTTTGT
TTTAGAAATTTATTTGAAACCACAACATATATCTACAGAGCAACAAACTATAACTTACAC
AAGCACCGCAAAACATTAGGACATGGCAAAACAGATTAGCCATCGCAAACATTGACTTCT
AATTTTTCACAGATTGCAACGAACAACTCAAAGCACATAATGGGCAAAATAACTACCATC
TAACACAAAAACTCTTTTTTTCGAGAAAACGCAAAGAGCCTTGCGTTTCTTTGTATTGAA
AAGAAGGGGGATTACAACCTCCTAAGAGGCAATTACAGCATTGTTACAAGAGGTTTAGTG
AACATCCCAGGATGGGGGCATGACTACCCTAAGCCCTTTGGCCCCAGCTCTCGCCCAGCA
CCTAATCTTGTCTTTGATCCTATCCAAGAGCTCGTCGAGCGATGGAGTGATATGGTCAAA
GACACGCATTCCTGTGTTTCCATATCATCCAGGGCACCAGGAGTGCGGCTGACCTCAGCG
CCTTGCGTAGCGATGGTGGTGTGGCATCCCTCGCCCTCATCCACCAGTCCTGGAGTGAGG
CATCATGCTCCGGCGACGGGGCCGTTAGGCGCAGCCAGGATAGGGTCTCGTGCCAAGCCT
GCCTCACGAAAGGGCAAGTGAGCAGCAGGTGCCTGATGGTCTCCGGCTCTTGGTCGCATA
GTAGGCAGCGGGTGTGATGAGGAAGGCCTCGGCGAGCGAGCCTTTCCGCGGTCCAGCAT