Map Locations of contig_189894 (4027 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_189894

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28187 2 1323 bp AK357948 Available Available None





CDS Structure of MLOC_28187






Contig Sequence (4027 bp)

>contig_189894 4027 assembly3_WGSMorex_rbca.fasta
TGCCCTGCCTCTTTCGGGAAGGTGCGACATGTGCTTGGGCGACGGCGGCGGGGGCAACAT
GGCCGGCGACGAGATCCGCCCGAGGGGAAGGAGCATGCGCGACCTCGACTGTGACGGCGG
ACAGCATGTGGTCCTCCATGGCGGCGAGGAACGACCGGGGAGGAGGAACCGAAGCTTGCG
GATGGGTGGCAATGGTGGCGGAGGGTGCGGGGAACGGGGAAAGGGCGCACGGAAATGTCC
GTCCCGCCAAATCTCGCGCCGGATAGGGGTTGAGCTCGGGTCGGCCTCCCAGCCCGTGAA
GATGGAGGTTGGGGGAGAAGATTTGCCGCGCCCCGCAAAAAATAATGCGGGTCGGCCGGG
ATGCCGGGTCTGCTCGTGCGGATTTTCCGGCCCCGACCCGCAATTTGGCGCTCATTTGTT
GGTCGGGGCGGGATGCGGGGTCTGCTAGAGTTGCTCTAAGGCACGTAGAGGCCATAGACA
ATCTCGTGGTAGCAACACCTGTATTCGCTGGCATCGACTCCGACACCTCGTGTCGCTGCC
GGGGAGTGACACAAGTGTGTGACGAAACGAAACTTAGGGAGGAGGAAGATCCATTCCAAA
TATTTATAACCTCAGTTTTTTGCAGAAATGGGAACTTTTTACTTGACACAGTGTCTTTCG
TCTGTGTATACTTATTTTCATTCTAAATTGGCACTATGATGGACATCACAAGATAATGCT
ATCTGCATTTGCCCTCGTTGACATAATAAATCTTGACGGGATCTAATAATAAATCATGGA
GGCAACTGTCCGCTGCATGTTGGGTTGCATGGATACTCGCAGTCTATCTCTTTCACTCCT
TGGCTCCTTCCATGGTACCAATCTCCTGCGGCCTCTGCAATGGTCTGCTCGACAAAATTG
TGATAATCCAGGTAACAACACGCCGAATCAGATACCACAGATTCATCGCAAAAGAAATTG
ATGGCATAGATAACGTGTTTTACGTTAGAATTTTTAATTCCCTACCTTATTTCCAAGCCT
CGGGGAGATTTCTGAATTCCAGGAGATGCCATATAGGGATTGACAGTGTGTGAAGCATGA
ATCGATGAACAATCCCCAGTCCTCCTTATCTTCGACAACATTCAATGCACCCACCATTGT
GTTCCTGAAGCCTATTTCACAGAGAAGCTGAATATTCAGTGTTTCGTTGCACAACAAAGA
CATTGGTGTTGAATGAGAGAGAGAGAGAAAAAAAGAGAAAATGACAAGCTAAGCTAACCA
TTGAGGACTTTGATTTGTGTGGAATTGCAGTTCCGGATATTATCCTTGCAACTCGACCAT
GACTTATCAGGAGCCGACGAAACTGGTACAAGAACATTCCGTACCTGTGGCGAAGAGTCA
TCGATAAAATAGTGATAACTTTAAAAGAGAAGTTGGAAGAAGAACAAAAAGAAAAATCAT
TCCAAAATACCTGCCATGAATCATACGCAGAGTTGAGAATAAACATGGGGGTGCGGGTGC
TCTTAATAAGCTCTGCGGGGAAGAAACACTAGGAGCAACATTATTTCAGTTAGCATAATC
TATTAAGGGAGCAAGTATGACAAGAAAATCAAACTGGACAATGGAAAGTACCTCGGTTGG
CTCCTTGTTGGCAAGGCAGTCCTTGGGCAACACTTCTCTAACATTCTGAAATAAATTTAT
CAAACAAAGAAAAAAATTAACTCAACAGCATTCAGTACAAAGTGGTATTAATCACATGGA
CGGAAAAATATTTCAGTGCTTATTGATTGTGGCACAAGACTAAACACTTGAAAAACAAGA
GTTTTATAAAGCCTTTTCTGGTATTCAAATTTTAGAGAAGTGCAAAACAGGACTAGAAGA
TGACCACAAGCCTGGATTATAAAATAAGGCATGTCTTTTAAAGTTTGAAGCATGTCTAAC
AGCAAACCTGGAGGTGAACAACGCCATCATAGACAGACCAAAAGGACCTTTTCCCAGAAA
TATCCTTTCTGTCGAAGAAAAAAAGTACTTTAGTTCAAGTGCAATGCTGGTGGTGGTGGG
TGGTGGGTCACATTTGTTTTCAAAGGGTCTTACACGTCAAGAAAAAACCCAGCATCAGCA
AGGCATTTGACTGAAACATCACGAGAAAACCGTGCACTGAAATCATCGCAATGCAGTATC
GTGGCTAGACCACCAGCAGAACAGCCTGTGAGGAGGGCCTGAAATGTGTAGAAAAATGAG
GAATGTCGCATGGGGTTGTTCGCAAGAAAATAATCAATGGTTGTTGCTGAAATTGACAGA
GTAATATTTATATACTGCCGATTCATGTTCAAACTATACGAACTTTGTAAGTTAAGTATG
ACCTGTGTAGCGTTGGCAAGTCCTTTTTCCATGAGTTCGTCAAGGACCGCTTGGTAGATG
CGCAATCCTCTGAAGTAAAGTATGCTTCCATCCTACATCATCACCAATAGAACATTATTA
CTTGAAGCAACGGAGATAGCGACATCAGACTAAGACTCAGAAAATTCACCTGTGCTCGAC
CTTCCGCGTCCCCGGAAAACGACGCCCCATCGCAATACCGCACAAACACTTTGTTCCAGT
TGTAGAAATCTGATTACACGCTGATCAAAGTTAGTGGGAATACATATGAAACAGGTAAAA
AAATACTATATGATTATGTAAACAAACAGGAAGATAACGATGGAACTACCAGGATTTTGC
AGCTGATCACTGCCGAGGATCCCAGCACCGGCGAAGCGCATCGGTTTCATGAAGTTGGAT
GAACCGAGCGCGTACATTCTGCGGTTGGAACAATCCTTGACTGTACTGCACCAACCTCCT
CCCTGGATGTATTTAAGTGAATAATATACAAGTCAACCACTAATTGGCTTACCTCGAGAA
CCTACCTGCTAAACATCCCTACCATGCAGGTTAATCAACTAATTGCCCTATCATGATAGA
AACATTAACAATGAAAAGGCATGTGCTTGGTGGTAACAGAAATTAGGGCGCGGGTCTCTA
TCTCAAAGTATACTTTGGTTATGGAAAATGTACTTTTCTAAAAGCAATGGGTTATCAAAA
GTGTATATTTTAAAGATTATCTAGTACAATTTGAGCGATATCTTCTTGGTAATTGGTTAC
GAGACGTGTATAAGAAGAATAAAATAACTATATACTCCCTCCGTCCATCAATATAAGATG
TTTCAGATACTTCAATATAGACTATACATACAGATTGAAACGAGTGAACAAATACACTAA
AATGTTTCTATATACATCCATTCGAATAAGAGAAAAGGTTAGAACGTCATACGACTGTTT
CATAAATAAATTACATTTGGAATACCAATAGTTAGATTTATATTGATTCATTACTTAAAA
TTTGATGTAAAAACTTAAAAGTATAGGTCATAAGGCCAGAAAAATCATATTTCATGTATA
TTTTACACTATGTTTTTATGTTTTTAATTCTACGTGACATAAAATATTTTTTATGATGAT
TATAATTTTTCTTACGATCTCTTTTTATGTATGAAATAAAAAATATATAACATAAAATTA
CGATGCATTGATGAAAAAATAAAGGGGGTAAAGAATAATTATTCTTCATCCAAGGTGACG
AATAGTCAACCCTTGATATATATTCTTCATCCAGGTAATCCATTTCATCCAGGGTGACGA
ATACCAATATATATGTATATATTATATAATAATAAAACGGATGAATGTTAGATGAGCTAT
CTCTATCAGTACAAGAACATTTCTTGTTCTTTGTGCAATTGGGACGACGCATGAAAAGAA
AGTATCACCATACGGACCTCGAGATGGATGAGCCAGCGGTTGGATCCGTCGCCGGAGCCT
CTCTGCAGGTGGTACCCCGGCGGGGTCCCGTCCAAGCACACTGCTCCCTTCTCCTGCGCG
CCGGCGAGCAGGGTCAACGGGACGGTCTCCGGCGCCGGCACGCCAGGAATGCCGAGACCG
ATCTCGCATTCCGTCTTCTTCTTGTAAAAAAACAAATTCATTTAGGCACCATCATTTCTG
ACTAATC