Contig Data
morexGenes
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Map Locations of contig_189797 (1499 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_189797

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28177 1 1012 bp MLOC_28177.1 Available Available None
MLOC_28176 1 321 bp MLOC_28176.1 Available Available LOC_Os01g72090.1, FRAME:+3, EVALUE:7e-13, 13101.m07854 protein phycoerythrobilin ferredoxin oxidoreductase, putative, expressed





CDS Structure of MLOC_28177






CDS Structure of MLOC_28176






Contig Sequence (1499 bp)

>contig_189797 1499 assembly3_WGSMorex_rbca.fasta
AGATTGATAGAATTTGGTAATGACCCGGCTTATATTTTACCGTAAAATAACAAAATTGCC
AAACATAAACTAAACTAGGGCTCTTGTTGTTCATTTTGTAGTACTACTCTTCTCACTGAC
AAAATAAACCCACCCCTGATAACACTGAACAGTTGAAAATAAAACACAGAACACTGACTA
ATTGTGATGCGAAGTTCAGGTAATCGAAACAGCAGCTTATATTTTTAATTATGTAAATAA
AATTGATGAAAATAAACTAAATTAGGGCTCTAATTTAGTTTTTGGCTTTCTAATTATAAT
TGCTGAACATAAACCAGGATCCCATTCACTCATAGGATAACAGTGATCACACTGACTAAT
TGATGGCAATAGAATAAAAGTGAAGAATCGATCGTCCTGAGCCTCCCAGCGGGGTACCAG
ACCACTTGGTGGGTCCTGCCTTAATCTCTTTGTGCTGTGCTGCGGTTCGTAGCACGATTT
TTTGGTTTTGGTTTGATGGCCCAACCCTCTCAACCACCGTTGTTGCCGTCGGGAAAAAAC
TGACTGCGACCGGTGCCGTCAAGATAAGCTTCAGGCCAGGTTATAAGACGTGGATTTTCG
TCGCCGTCGTCTTGGGGTGGTGTCGCTGTCCACGGCACGTCCGTATGTGCGGCATTTATG
GGCCGACGGGGTTGGAATATGATGACATTTGATGCCATTAGACGGAATTCCTGCTCAGCT
ATCACTTACTTTCTGAGCTAGACACTTCACTGTCTGTGTTGTATTGTAGGCAGTTCAATA
CTTGGGTGTACTGTACGTGCAAATGAATGCATAGCACACAGCACAGTGGTTGGTAGAAGT
AGAAATGGTCTAGCTTGGTGTTCACTGGCCGTACGCACGCTGTCCGTCGCTGCCGATCCC
ACCTAAAAAGGGATCTGCGCGCACCTGCCCGGCCGGGCACGACGATCTCGTGCCCTTCTT
CAGTGTCCTGTTACAGCACTCCCACCATTAATTACTATAGTATTTGATGTTGCCTTCTTT
TTTGACATGCTGAGTGCCCCCCTTCCTATGGCATGATCATAATTTCTCGATGCATTAGGA
GTCGAGTTGGGTGGGCTTCCAAGGAGAGGAGTATCCCATGCATTAGGAGCCGAGCACTCC
TGAAAGTGTCAACATTTTTTATTTATGCAGTTGTCCATCTAGAATGTCTGAAAGTGTAGC
TCTCTTGTGATATCAGCTGACGCCAATGACATTTGCCATTACAGAAGATGATTTTGTCCT
GTGTCATGCTTCCAGGAAAAGTTCAAGCTCATACGAGCCAACGACGATGCTACTGTGTTG
GACGCTCTCTCACTCAGCACCCCCAAGATCAGACTGCTTCGTAGCTTGACAGTCGAAAAG
AAGAATTCTGTTCAGGTACATATATTTGGTAGTAACATATGGAGTCATCAAATATCTTGT
GGCATGATTGCCCAGTGGGCAAGACTGACCGGTAAAATCTACTAAAGCAGAAAGGGTGT