Contig Data
morexGenes
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Map Locations of contig_189620 (2070 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_189620

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28157 2 1316 bp MLOC_28157.1 Available Available LOC_Os06g31070.1, FRAME:-2, EVALUE:4e-17, 13106.m03216 protein PROLM24 - Prolamin precursor, expressed
MLOC_28158 1 570 bp None Available Available None





CDS Structure of MLOC_28157






CDS Structure of MLOC_28158






Contig Sequence (2070 bp)

>contig_189620 2070 assembly3_WGSMorex_rbca.fasta
TCACCACTTCATCGATCAACTGAACATGTATTGATCCAGTTAGCACAGCACAGGTAGTGG
CCACAGGCATGCTGTTGAGGGGTGGTGGTACAATAATCCTGAGATATATGAGCTGCGCAT
CGACAGGAGGGTGTGAAGCACCATGCTCATTATCTCGAACTGAACCTGCTGCAGAGGCTG
GCCGTAACTCCACCATGTAAAAAAGGTTCGGTAAGGTGAGAGGCTTCTGAGATTTCATTT
ATCATGCAAAACAAAACATGCAATTTTATTCGGACAAAAGCTTTATTCAGAAACAGAGGT
TTATTATTTCCAAGTTGCAATAGTACCGGCCACACATGATGACGTATGGCACTTTTATTT
TGTAGCTCTTCATCGATCAACTAAACGGTGATCGATCTAGCTAGCACATTACAGATCTTA
GCAGACACCACCGGCACAGGTAGCTGCCATGGGGATGCTGTAGATGGTGGGGGTGATGGT
GCTGCACGGGGTGGTGGTGCAATATTGCGGGATGTTCACGCTGCACATCGACGGAAGGGT
CTGAAGCACCATCCTCATTACCTCAACCGGAACCTGCTGCTGAGGCTGGCCGAAACTTTG
CGATTGCTGCTGCTGAGGCTGAGTGAAACTCTGCCCTTGCTGTTGCCGCATGATGACCTG
TGCCATGCTACAGACGGCCTGGCACCGAGCCTGCTCCGAGATATGGGCCAGCGGCTGGCA
GCATTGTTGCCGCATCAACTGGCAACCGCTTGCCTGCCACATCTGTGACTGGACGTATGG
TGTCCGGCTGCACTGCTGCAGGAAGGCAGCACATGTGTTCATCTGTTGCTGCGGCTGTTG
CTGGCACTGTCCGTAGCCCTGGCTACAGGTAGTGTCCAGCTGTGCAACGGCGCTGGTCGC
CGCGAAGGCGATGAGCGCGAGGATCAGCATGGTCTTCATGGTGGCTGGCTACAAGTTTGC
TTTGATGCTTGTGTTTGTGTGAAGGGTGATGAGGGAGGATCTTCATGGTGCGGGCCTATT
TATAGCTACCATGGCATCATTTGGTGCATTGCATCTGTAGGTTCCTATGCTAAAGGTTTT
GTGTGCTTTTCCAACTGATCATCTGACACACTTGTGTTAGGTTGGGCTACAAGTCCAATC
TTGGATGGTCGTCAAATATACTTTTCAACACATATCGTGTAGATGTCAGTTAGCTCGCGT
CTGACCTCGATGATCCATATGACTCATCACTGAGCACTTTACATGTCAACCGTATATCTG
GATTGAGTCTTTTTGTGAAATTCATTTTGCTATCTTGTATGAGTTGTTAGATATAAATCA
GCTTGCACCTGACCACGATAATCCATATGACTCATCACTGATCACTTTACATGTCAAGCG
TATATCCGGATTGAGTCTTTTTGTGAAATTCATTTTGTTATCTTGTACGAGTTGTTAGAT
ATAAATCAGATTGGCATGCCCCGCACTCCCATCTCATTGTTTCCTGAAAACTGGTTTTGT
TATCTTGGATTTTGTTTTCCTTGTACTACTTTGGTAATACAAACGGCATCAGTAGAGCAT
TGATGACTCATAAATTTCCCTTTACCTGTAAAAGATTGTCATGGAGCTATGCTTCGGGCG
TGTGAAACTGAATTTGTTGTTTTTTGTACGCCGAGTTTAATTGCTTCTTGGAACTGGTTT
TGTAGTCTTGTATAAGCCGATAGGAGATAAAATGCCATGAGTCATCAAATGAGTTTTACA
CACTGTTTAAGAATTCATCCGATTAATGAGTTAATTGGCCATTTAATCGTTACTCATTGG
ATGGCCGAATCGAATAACACATATTCATTGCGTTAACTTACCAAGACGATTAAATGGTAT
GACAGACCGATTCAATGGTTTGTTAGATGCCGATTAATTGTTGTCGGTAGGTTAACTCAT
GGGAAAATAAAGCCTGATTATTTCACCCATAATCCCTCCTAGCCCTTCCTTCACCCGCCC
CCTCACGCTCCTCTCATCCCCTCCCGACCTAGATGGCGGTTGGCCAGGTCCTCGTCCGTG
TGCTACCCATTCCCCCCCCCCCCCCCCCCC