Contig Data
morexGenes
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Map Locations of contig_188368 (2364 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_188368

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_28022 1 316 bp MLOC_28022.1 Available Available LOC_Os01g19450.2, FRAME:-2, EVALUE:5e-18, 13101.m02116 protein ATP-citrate synthase subunit 1, putative, expressed





CDS Structure of MLOC_28022






Contig Sequence (2364 bp)

>contig_188368 2364 assembly3_WGSMorex_rbca.fasta
TAGATGCATAATACAAATATTTCATTGGACTTAACTACAACAGCAACCTGGGCCGGTCCT
GAATTTGTTGGAGTAATGTAGAAGAAATTATCCAAGCATCTTGGATCTGGCTATGCTCCT
CTCTTGCTCTCCGTCCTTGTCTCCTTGATTCCTTATCTCCAGGCCCTGCTTATCTCCCCC
CAAGCAAGCAGCAACCTGCACACAAGATAGAAGACAAATCCAAAAAGAACAAAACGTACA
CAGATCAATATCAAAGGGAGAAAATAATGTGAATATTACATGCAATCTTTCAGCCTTGAA
CTGGTTGTTGCCTGACCCGGTTATCTTCTTTTTTAAGTTATTTTTTTTGTTCAAAGAAAC
AGGACTTAAAGCAAACTAGAATAAAAAAAGTAATTTGTATTTATTATTTATTTTTGCTAA
GTGATTTAGTGTTATTTATTGTTTATCCTAAGATCATGCTGCCACCCAACCGTTTTGTTC
TAAAAAGGTAAATGGGAGTGGCTAAAAAGATAATAGAGATAGGCCAAAGTTATGGTAAAG
GAGTAGCCTCCGAAAGTTAGAAGACAAAAAGGATGTGATAAAGGAACACGTAACAATGAC
ATCATGTGATTATTCAATCATTCCAGAGAGGAAAAATATAATATTAGCAGAACACTTATG
CGACAAAGATAATGGATATTGATACACTACACGAAGATGGTTAACACTATCTATTTCTAT
AGAGAATTAGAGATGTTAAGTTCCAAACCTGAGGTATGTTATTCAAACGCAGAATCGGAT
CTGAAAGAGTTGAGCCAGGGAAAATATCTCCTCCAATTGCAATTCCTGAATATGTTCAAA
AAAGTTAGCATGGTGCATTATTCATGTGAACCAGTAGCCATTTACATTTATTCACAAACA
AGGTACCTTCATAAATACCATCAATCACTCTTGCAATGTTGTTGTACAGCTCATTTGACA
TGCAACCAAAATATATAGTTGAGAATATATACTAGCCAGTCGTCAAATTAAAGTGGAGTT
CTGGAGAATGAAAACAAATGGGAAAAGTCAGGAGAGCTCTCCACATTTTTCCAAATAAAA
AGATAAAAGCCGAAGCATCATAATGGTGTTCTAAAGTTCTAAGACTCTCCATATATATGT
AAACAAAAAATCGTATTTACACACAAAATGGACAGTTCTTTTTATTCTGTTACTTTATTT
ATGGACGTGAATCATACGGAAATACATGTGATGAAGGAAGTAAGTTTGTTAACAACGAAA
CTGAAGCATACCGATTTAGACACAAAACCAACTGATCCGGGCCTGTACAACTTGCATTGA
ATTATGTTGTTAATGGTTCGAGCAATATCACCAATCTTGAAAGCACCAGCCTGAACTCCT
CCGACTGTTGCAGATCCAATGATGAACTACAAATAAGACTAAATCACTTAGCAAAAATAA
ACAATAAATACACAGGCCACCGTGACCGTGAGCGAGGGGTGTCTTGGCCGTGCAGGGAGG
CCCTGTTGCCGCACCGTTGGCAGAGGGAGGGGGCGCAGCATACTCCCCCGTATATATCCT
AACCCTCACCGTCGGTGTGCCGTGTCCGCCGTCCGATAGCTGGATGAGCTTGAGGCCGCC
GTCCTTGACGGTGACGGAGATGGTGTCCACCATTCTTATGGGCTTCTTTGCGTGCTTGTG
CCAGGCAAAGAACGGTGCTGATGGAGAAACTTTTAGTTCCGAGACTACTACGCCATCATT
CTTGGTTAGCAAATGAAAATGGTATATTCTTATACTATATTCAGATAGTTTGAAGCGCTA
TTTGCTACTTGCTAGATCCTTTTACTTGAAGTTTCAATACTTTTTACTTTTGATTGTACC
ATATGTTTAACATTAAGCATAGCTCATATCCAAATATAAGGGGAATGATTGATGCAATAC
TATCTAATTTTTTTACGCAATCTTTTATCTAAAACTAACTTCGAACAAGAAGTGTAATCC
AAACCATGTCATTTTTACATATTCATGTCGTTCAACTGTACTCAAATATTTGCATTGTTC
TATTCACACTATAAACGGGCGTGACAACACATGCCTTCTGAACACATGTCGTTCAACTAT
ACTCAAATAACCTACTCAAGACAAACTGTAACAGAGCATGAACCTCTATCATTTTGTAAC
AGAGCATAGCATGCAAGACTACGACATCGAGCTACAAAGCTAGCTAGTATGAGATTCAAG
GCAAGAGCGAACGGGCTACCATAGCTGAATCAACAACCTCAGCAACCACAGTCTCTCGCA
AACAGTTCATACCAATACCAGGGACCACAGATAGCTAAAACAACTATCTTGAGGAAAGGG
GATCGCATATGCGGAGAGTAACCG