Contig Data
morexGenes
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Map Locations of contig_187096 (4149 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_187096

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_27889 1 1238 bp AK251556.1 Available Available None





CDS Structure of MLOC_27889






Contig Sequence (4149 bp)

>contig_187096 4149 assembly3_WGSMorex_rbca.fasta
TGGCTCCCAAATACTATGGGCCTTTCAAGGTCCTCGCTAAAATAGATACGGTTGCTTACC
GTCTGGAGCTACCCCCACGCGCCCGCATTCACAATGTCTTCCATGTCGGTGTATTGAAGA
AATACTATGGTCCTCCACCAGAAGGTCCGCCGATGCTTGCCCCACTGTTTCAGGGTCGAG
TACATCCAACTCCTGTCCAGGCATTGCGTGCTCGTATTGCTCGCGGTATACAGCAGGTGC
TCATTCAACGGGAGGGACAGCCTGCATCTGCTGCCTCGTGGGAAGATGGCATAGCCTTCT
GCGACTTTTATCCAAGTTTCCAGCTTGAGGACAAGCTGTTTTAGAATGGAGGGGGAGATG
TCATGTGGGGCCAATCCTATAGGCGCAAGGGCCCTGCACCTGCCTAGTTATGTCCTAGTT
TAATTAATAGAGTCCTTTTAGATTTAGGAGTCTGGGTATTAAGTTGGAAAGGTTTAGTCC
CGAAGAAGGTTACCCTGCCAACAGCCAATTAGAGTTGGAGTCTGTAATCCAGGTCTTGTA
ATCAGGCTACTTATAGCCACCCCTTGGGAATCAATGAAGGCAAGCAGAAAATAATCTAAC
CTCTCTCCCCTCGTGCATCTGCGCCTCGGCGCCCCTCCTCACCTCCTTCCCCGACAATAG
GTCGACGAGGGGTTCGCCCTCGTTCTCCAATTGCTCACGAATACAACCTCCACTCCAACC
AGGGCCCAGCCCGTGACACCACTGTGTGACTTCTGCGGCGTAGCTCAGTTCGAGGTGATG
TCAGCACATGCTCACTCATCGTAATCATCCACCGTGATGGATGGCCGAATCGAGTGGTGT
AGTGGCCGTTGTGTCAGAGAGTTATTAGATCCTGAACGTTAGCTCCATAATTTTTTCCGT
AAAAGAAATAGATAGAGCCTGCACTTACTAATTTCATAGCCATGACTTGTATATTTGACA
TACCAGAAACTAGTTCATGTCCAGTGAGTGTAAGCAATGTTATTTTTTGCATTGTACAGA
TGTTTCTTTTGTTTGTCTGTTTTTGCGCATTGATGGTCTTAAATATTACATAGTGATACC
TGAGAGCAATGCAACAGGGACTTGAATAACATAGATTGTCTCCTTTCCAGGTTGCATTAC
GACCAAGGAGCTGGGAACTGTCATGCGTTCCCTGGGGCAGAATCCCACTGAGGCAGAGCT
TCAAGACATGATCAATGAGGTGGATGCCGACGGCAATGGAACAATTGATTTCCCCGAATT
CCTCAACCTTATGGCCCGCAAGATGAAGGACACTGATTCTGAGGAAGAGCTCAAGGAGGC
ATTCCGTGTGTTTGACAAGGATCAAAATGGTTTTATCTCTGCTGCTGAACTGCGCCATGT
CATGACCAACCTTGGTGAGAAGTTGACTGATGAGGAGGTTGACGAGATGGTCCGTGAGGC
TGATGTTGATGGTGACGGCCAGATCAACTATGACGAATTTGTTAAAGTCATGATGGCCAA
GTAAGTTGCATTACCATCTGAGGGAAGCTTCGGTTATCAGACCAAAATATTACCTACCCA
GGTGCCATTTTGTGGGATGGCTATTGTATTGAACCGAAAACAATATAACACTGTGTGGTG
TCATATGTTGTAGGCAATGATTGTTTGCCTTGAAGATTTTATAGATCCTGCCCTGGTCTT
TCTGAATTTGTCTGTTCCGTTATTTATGTTTGGTTCGCTTCAACTTTTCAAGAGTGTAGC
CACAATGTGTTAATGAATAACTATATTTCACCGTTCCATGATTTCATTCCTAGCTCACAA
TTTACCCCTCAGTTATTGAAGTGTTATACTGTATGTGCGTCTGATACGAGACATAGCTTG
CATCTTTTTTTGGTAACTATAAATGAAATACAATATTGCTGGTAACGGAAGTATCCACCG
TCCCTGAACATGAATGGCTAAGATTGTTTTCTTGCTTTGTCAATATTACCCAAAATATCG
AAATTTCCTTAGTAGTGGCTAGGGTTTTTCTCCACGCTAGCGATTCCACCCCTGACCCTG
CTCGGTCGGCAATCGTCGCTCCCTGTTTCCCGCGACTAGGGCTTCGTGACGAGCCCCTCG
CTAGACGCATTGCTCCGTGGTCTGATGGCTACATCGTTGGACGTGGTCTGATGGCTACAT
CGTTGGACACTAGTCCGCCACAAGCAGTACAATATAACACCGCGAAGGATGATCTGGGAG
CCTTCCTAGATTAGTTGGATTTGAATGATGAATCTTTTGATGATGTCACGCATCGGCGAA
GGATGATCTGGGAGCCTTCCTAGATTAGTTGGATTTGAATGATGAATCTTTTGATGATGT
CACGCATCGCTCCCTGGTCTGATGGCTACATCGTCGGACACCCAGTCCGCCACAAGTAGT
AGTTCTCGTAATACCGCGAAGGATGATCTTGAAGCCTTCCTAGATCATTTGGATTTGAAT
GATGAATCTTTTGATGATGTCATGCCTCGTACCCTGGTCTGATGGCTACACCGTCGGACG
CCCAGTCTGCCACAAGTAGCAGCTCTCGTAACACTATGAAGGATGATCTGGAAGCCTTTC
TAAATCAGTTGAATTTGAATGATAAATCTTTTGATGATCTCGTGATAGATGATCAAGATC
CTGTCCTGTAGGGAAGTGTGCGCTTGTTAGCTCTTGCCAGGGTTCACACGGACAAGACCT
TCAGCCAGGGTGCCTTCTACGAAGACATAAGGATGACACGGAATCCAGCGCAAGAAATCT
GTTTCTAGCCTGTTGGTCCTAACCTCTTTGTTGTCGAAGCAGCGTGTGTCGGCGACTGGG
AACGGATGATGGAATAAGGTCCATGGCTCTTCAGGAACTGAGCTGTGTTGTTAAGCCGTT
ATGACGGTTTCAGTACGACAAAGAAGGTGGAGATTGTGTACTCCCTTCATTTCTAAATAT
AAGTCTTTTAGAGGTTTCACTAGAAGACTACATACAGATGTATATAAATATATTTTAAAG
CATAGATTCATTCATTTTACTCCGTATGTAGGCTCCTAGTGGAATCTCTAAAAACCTTAT
ATTTAAAAACGGAGGGAATACATGCCAATCTGGCTGCAGATACATCGTCAACCTAATGGG
TATTGTAAGAAAGAACCTGTGGAAAAGTTGTTGAAGACAATGAAGAGTGCAGGGAAAATT
CTTGAGATGAGATTGCAAGTAAACACAAGTGGTGACTATGTGCGGGCCCGCGTTCGTCAT
GACGTGAGGTTACCTCTGATCAAGTTTGTCAGCGTAGTTCGTGGTAAAAAACGTCGGGTG
TATCTGGTGAGGTATGAGAAGCTTGCTAATTTTAATTTTGTCAAGTCTGCGGCCTTATTG
GCCATGGTTACAAGGAGTGTGGTTCCCGCATTCATGAGGAGAAAGGTAAGAAGTTTGGGA
ATTGGCTTTATGCTGACCCTCCAAACAGACCGACGTGGTGTTGCCTCTGGTTCATGGAGA
AACAAGGGCCCTTCGTTTGCTAGTCCAAGCAGGCAGGGGTCAGGCAAGGCGAAGGAAGGA
TTTGATCCGGCTACTGCTCATACAACGTCTACTCATACAAACAACGATCATGCGGATATG
GACTTAGACAAAAGTGCTCGGAAGAGGTTGCACCTTGATCACGTAGCTGCTGATGGTTCG
GGTGCATCAACTCAAGTATGTTGAAGCCGTGGATCTACTAGGCATAGATAGATCCGGTAC
AAACCTGTGACTTTACCTTGTCCTGAGCCGGATGAGCTCCCACCGGTCTCCATCGGTGTG
GTAGTGACGGCGGTGACGGAGAAGAAGGGTCTAGCGTGGGTGGAGCTTCCCGTGAGCACC
GCGCTAAACCTAGATCGGATAGGTATGTCAATAGGGGTGTGGCGGCGACGAATCTCGTAG
TTCGTGCCCCGGCACCTCACCGTTCTTTATATAGTGCGGGTCACAGGGGCCCACCAACCA
TAATGGGTTGGGCGCCCCCGATCAGGGCACATAGATCAAGGCCCGGTGGGCTGTTGGGCC
GACGCGGTGAGAGATCAATCTAACATTCTCCCCCTTGATCTCGACTTTTACTTTTGACTT
TATACCTTTTATTTGTTCCATCACACATAGGCATGTAGAGCATGTCTCATCGTCACAGCT
CGTAATAAC