Contig Data
morexGenes
Links



Map Locations of contig_186163 (4645 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_186163

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_27773 1 2033 bp AK361745 Available Available None





CDS Structure of MLOC_27773






Contig Sequence (4645 bp)

>contig_186163 4645 assembly3_WGSMorex_rbca.fasta
TGTAGTTTGGGAAGCATCAGCGGCTGATTCTGTGGCTGTATTGGTCATTTAATGGTTCGA
GGATTTCAATGTAATTTTTATCAGGTTTGGGATGCTCTGTATTTCCAATGAAAATTAGAG
TATTTTACCAAAAAAGAAAGTTGCACAACCAGCGAGCGAATAAAACACCTGTCGCAGGTT
GCTGACAGTTAGTAGCAAAGCAACAGTACCTTGGAAACCTACACATATCCACTAACTGTT
CTTTGTTAACTCAGAAACGTAAGGATCACACCTCCCAAGTTACTACAGCCAAGATAGATC
GGATGTCTACTTGTACCATGACTCGAAAGTATGTTCCTTTCGGCAACCGGCCAATCTTCC
AATTCAATCGGACGATCCATCTGCAGAGTCCACGTCTACAGGAGCTGCACCAGCACCGCG
GTAAGCAGCAGTCTCCTCTGCATAGCGTTTCTTATCCACTTGGGACTGCTCAAGGTATGG
CTGCTTCTCCTCAGCTGCAAATATGACAATTGGAAATGATTACAACAGGAGGGTTTTTTT
CCTTAAAAGAACTGACAGTATGAAGTGCACTGTACTGCTATTGAACTTAGGGCATTGTTA
CCTGACATCTTTTGCCATTTCTCTCCAAGCTTCTTTGCAATATCTGTGGTGCTGAGTTCG
GGGTTGATGTTCTTCAAATTCTGCATTAGAAAAATATCAATCGAAGATCCATTGTTTACT
TAATTTAACAGTGCAGGCTAAATGTCTTGAGAAAGAATATCAAATCAATTCTAAAACCTA
ACATAGCAACTGCAACGACAGAAATGAACTAAAATTCATCAAAAACAATGCAGGATACTC
TTATTTAACTTTGACCAAGTTCATAGAAATAATAGTGATCTATAATACCAAATAACGTAT
GAAAAATATGTTTCATGACGCATCTATTGGTATTGGTTTGATGCAGTTTGGATGGAGCGG
GTATGTGTTTGGACTAAAATTTTGTCACCATGAAAGCAGAAAATTTAAATATGGATGGGT
GCCAGTAACTTACAGCTCGCTCAGCCTTTGAGAAGTACATGAATGGTGCTATTGCTCTTT
TCGGGGCATTGGGATCTTTCGTCTTCTTCTTCTTCGGCTTTCTCTTCTCTGAACTTTCCA
CATCCACACTCTTTGGTTTCCTCTTCACAGGTGGCTTTGAGCTACTAGCTTCCTTTTTGG
AAGATTTCTGAAACAAGAAGTTATTGAAGCAGTGGCTTGATACATGTATTTTGGTTCAGG
TAAGTTTTCTTAGGGATACTGGCAGCGTAAATTTAGTTACCTCCTTTTCTCCATCACTTA
TGCTGGCATCAGAACCCTCTTCAGAATCATCACTAGGGGATCCGCTATCATCCTTGTCCG
CCACAAAATCTTCGTCCTGAAGTTGGAACGAGTTACAGTAAGATTTACAAACAAAAAAAT
TACCCATTCTACTCCATGACAATATAGGCAAAGAAGAGCAAAGATTGCACACACAAAGTA
CCTCTTCATCACTTTCTTCATCACCAGCCTGATTTTTAATTCGCTCCAAATGTGGATCAA
CAGGGTCATCATCAGTGCTCTGAAGAGCAGCCGCGACGGCACCAGTTCTATCTTGGCCAT
CTTCTCCAAGATTCAGGATTTTCAAATTCTTACCACTTGAAGAGAGGAAAGAAACAAGAA
CTTATCATCCCCGTATGAATTAACTGATGATTAAAGCAACAAGACATCAGCATTTACCTT
ACGAAGTTGAAGAGGTTATGGTATTCATTCCTTTGTATATTTCTGAAGAGATGTTCTTGG
TCATTCTTTAGCTTGACCAGGAGATCAAAATAGTGAGATGACATGCTAGCACCACCAGCA
CCATGGCGCTCAAATTCAACATACTCAATCTGCAGTAAATAACAGCTTAGCAGAGGACAA
ATGGATGAAGAACAATTAGGCATGCCAAAATGTAAATAACAGACCTCCTCATGCAGAATG
AGTGTCGGGGGCTTTGGCAAAAAGAAAAAGCCTTTTTCAAGAGGATACAGCAATCCATCT
TCAGCTTTAAGTGATGATTTCACGGCATATCCATCTTGACAACTGCGGAATGTGCTTGGC
CTCGTCACTTTAGCACCAGACAGGCCACGAAGGATTTTGGAGAATACCTCATGTTCTAGA
CCCTATGTGTAAACCAAACATTTTGTGAGTTAATTAGTTTATCTGGAGTATTATACAATA
AATTAAGATCCCAGAAAACTGTGCACAAGTAGAAAACAGAATATAAGGGGGCATTCTTTC
ACTAAACATACTTGCAAGCAGAAAAATTGCATGTCAGTGGCTCTATAATTAAGTTCTGAA
TGAAACTTTACAAATATAAACACAGATCATTTTCTAATAAACCCCAAGAGTTAGGTAATA
AGTGTATTGGAGGGTTACTACTTGTGTTTCAACAATACATAATCAGTAATATATACAGTA
TGCTTTATGAGTAGTATGCCATTAACTCTTGTATTATTCTATTACTAATTCTTGTATCAT
TTCTTGTACCTACTAATCAATAATAGTTCAAAACACTGACAAAGGAAAATAAAATAAACA
CGAGCTAAGATCAAAGTTCAAAAGAAAACAAGAGGTATGATCAACTTTGAGGTGAAATAT
GTCGCGTTAAACTCAAAAAGAGATGCAAGGAAAGTCAGCCATTAAATGAATAAGCATATC
ACATTGTAAGAACTCTGCAGCCTGTCCTTGTACTTTTCAGCCAAAACCTCCTCACTTAAT
GACAGCTCCTTCTCAACTACATTCTCTGTCACAAACTGTTCATAGAGGAACCAGTTATTA
AATGTCATACAGGAACTGCAGCCAAGCTAGTGTAAAATGTATCATAATATAATACCTGAA
TAACAATGTGGGGATATAATGTTTGTCCTTTGCGAATTGGCGGATCAAGTGTGATGACCA
CAAAGGTATGAGGGTTGTTTGACTGAAGGGCACAAAGTATAAGCATGAAATCATATTAGC
TGCTTGACAGTATACGAAGGCAATGAATTCTTGAATTCTTGATAATATTCACAAAGCATG
AAACTAGTGAACCTTTGGCAAAACAAAGAGCCGAAGAATACTGCTATACTGGATTTTGAA
ATCATTAGCTTGTCCTTGGAGACGCAAGAATGACATATGAAGCTCAACAGTGTATCGACC
TCTGAATTAAAAATGAGCAGTTAGCTATGACATGAAATGGAAATAAATAAGCATAGGATA
TGCTTATTTTAGGAAAGGCAGAGTCTACAGTTACAAGATTTTCCCACCTTGGGGTAAGAA
TGGCAATTCCCTCCAATGAGACAACAGCCTCTTCTGATGAGCCAACATCAGCTATAGCCA
AGATTTTCTGCCAAAAAATCTGAAGAGAGAACGTTTCACTATTTGCGCAAAATATGCATG
CATGTTGTCATATAGCGTGTCTATCAAGTGAACTCACATGAGCCGAAGGACGTTCCTCAT
CTCCAAGGAATTGTGTATTTGAAGTTGGTACATGAAAACTTAAATCCATCAGCGAATCTT
TCTGCAGAAAATGATGAAAAGGGTAGTTAAAATCACTTGTTTTGCTAATGATCTTACAAA
GAACTGTAGCTAGACACTTGCAACCACAAAATGTAGAGCATTAAAAATGCACGGTTTTTG
GGGGAAGATCAGAATCCTCAGATGGTGCTCAATGGTGCATTTACATTCAGCACAATAGAA
GATTTGGAAATTGTATCTCTTATGTGTATGGCCTAACCACAGGAGCAAGTTAGACCTAAA
ATGCCTAAAACAAGATTGAAAGAACAGCTATAGGCACATAATCTTTACATACACAGGCAA
GGAAACTAATAAGAGTCTCTATAAAGAGAGTAAAAACACATATTCTAGTTTAAAAATATA
CACCAATGTTGAGATTCAGACACAAAAATTTACTACCTCCACTTGTAATTAACTGTCTCT
GAAATGAGTGTATCTAGAGTTCTAGACGCGCTTCAGTGTGTAGATTCACTCATTTCAGCG
ACAGTTAATTCTGAAATGAGGAAGTACCTTTTTACACCGGCAACACTTTACAAAACTACA
AAGTAACTTTGATCAAAATATACAGGCAGACAACAGACCTCATTAGCCCCTGTAGTATCA
TCAACATGGAACTCAAGAACAACATCTGTTTTTCCTTGCAACTGAGTTTGTGATACATCT
GATAGAGAGACTTCAAATGCTTCCTTCGAGCCAACATTAAAGCTAAGCATATTGCCTGAA
ATGGGAAGAATGGGAAAATGAAACAAAATTTACAAAAAGGGAATGGAGTACCCACGACCA
GACAGACTATAGAGAGCTCAGTAACCATTGATGTCGACCGCGCCCCAATTATGTCCACTA
ACAGAAAGCTGCTTCTCCTCTGGTGTGGTTCCCGTGTTCTTTTGTATGAAGTTAGTAAGG
TTACTAACATCCTACAGAACAATATGAACAAAATATTTCTCAGGTTACAACTAGAGTTTC
ATTTATCCAAGAAAGATTGAACCTTGACACAGAAAGCAGGTGTAACTGTGATTGTATAAC
TGCATCTCTTCATTGTCAAGTGAACAATCAACTAATTTCTTCGTGGGGAGGGGGGTAGGC
TATTACCTGTTCACGGAAGCCTTTG