Contig Data
morexGenes
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Map Locations of contig_185682 (3911 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_185682

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_27727 1 908 bp MLOC_27727.1 Available Available LOC_Os03g21650.1, FRAME:+1, EVALUE:2e-26, 13103.m02598 protein expressed protein





CDS Structure of MLOC_27727






Contig Sequence (3911 bp)

>contig_185682 3911 assembly3_WGSMorex_rbca.fasta
CATGCAACGTTCCCCAACACAACCTTGTTTGTAGAGGTTCGGTTGCCGCCTTTAAGGACA
TCACTAGTGGAATCACGATATCTCGCATTGTGTGAGCGTGTGAGGAGAATACGGTGGCCC
TAGTGGCTTCTTGGAAAGCAATGTTTGAGCACACAAATTTGATTCCCCCGTTAACACCTT
ACGAATCTTTTTACTCTTTGGTGTTTGAGCACACTAGACGGCTCAGGTCACCTCGGAGCC
ACAATCCATTGTGGTGACGCTTCATGGTGATGTTGAGAACCTCCAATTAAATTGTGTAGA
TTGCACCAACCTTGTTTGTAGAGGTTCTGTTGCCGCCTTTAAGGACACCACTAGTGGAAT
CACGATATCTCGCATTGCGTGAGCGCGTGAGGAGAATACGGTGACCCTAGTGGCTTCTTG
GAAAGCAATGTGCCTCCACACAACTCCAATGAAGACGTACTTTCCGTCAAAGGGACGAAA
CTACAGTAACACATCCTCAACTCCATCAGCTCTACTCGTAACTTCTTACCTTTATTTTGT
GCAAGCTATTAGTGTTGTATCATTTGCTTGCTTGTATTGTTGTTGTTATTAGCATCATAT
AGGTNNNNNNNNNNNNTGCATATCTAGACAACCTATTTGTTAAGAAAATCTAAAAATTGA
TAGTTGCATATTCAACCCCATCCCCCCCTCCGGCCCTCCAGTCAACCATATTGATCCTTT
CAACAAGGATGTGGTCGCAAGTACGCGTGCATCGACACGCGCTTGCTCCTACTCGCAAGA
GGAGACAATAGGGTCGGCTATGGGCTGGGCTTTGCTACATCACTGGTCAACATGTAAGTT
TATTGTCTGAGTTTTATTTTCTTTTGGCGCGTGTTTTTATTATTTCGCGCTGCTTTAAGA
TTCAAAACTCGTGTAAACCAGTGCCAAATCATTTTGGCTCTTTTTATATGACTATTTTGT
ACTTAACCAAGTGCATATAAAATATTTGAAAATTATCGAGCTTATATTTTTATCTTATGG
CAACAGAAACTCAATTCAAATACAATATGATTTAAATCAAAGTCCAAAATAATTCCATAA
AAATGTTTACTCTCTTTGATTTGGGTCATAACCCTTACCAAAAATATCGAACATCATTGA
AGAGCATTTCGGATACATTGAATGCATTTTCAGAGTTCTTTCCTATTTATTTAATTATTT
TTGAGGTTTTATTTGAAAATTTCTCAATTCAAATTTCATTGAATTTAAATATGATGTATG
ATGCTCTCTAATATAATCATTTACAAGTAAATATTCTGGGGTTGTGACATCTAGCTAATG
TGTGGCAGACATACACATGCATGTGGAGTGGGGGAGGTAAAAGAACACGCATACGAAGAA
AGCTCTAGGGCCAAAGGTAGTATGCATGTGTGCAGAACGATGTGTAGCGCGGAACCTAGC
GACAACGTGATCAGGCGATCGGACGGCACAGCGAGTGGCTGATGGATGCGGTCAAATCAG
CCGCCTGATTTGGAGCTTTTCTCATGTAAAACAGGTATTTATCTGGGAGCGCTGGTGAAG
TTGGCTCGGTAGACACATCCATTTGAATTTGATTGAACAGTTCGCACGGCTAAACACAGG
TTCGTTTTCTAGAAACTAATCAAAAGCGTGGACGAAATCACTATTCTTTTTTTTTTTTAG
GGAGAAATCACTATTCTTAGGCGTCATGAAAAAGGTGAGACAAGGATATCTTTTAGAAGA
AGATCAACTCCTGTTAAACTTTGGTAAAAGGGTCCCAAAAACGCCCTGATTAAAGCTAGT
GGCTCATGGAGTCATGAGGCGTGCATCCCACGAGCAGCAAGCACGATGAAAACAAGCGAG
ACGTGCAACAGCAACCAAAAGCCGGCCACTCGAGACCCGGAGGGCAGCTCCAACTGGAGT
CTTGCTTGTTGGTGGGAGCCAAACCTGCCTAGGACTCCAAACCGACAGCGCGACGCCCGC
CCACAGTGTTCCGCCGATCCCATCGAGTCATTAAGCAGAGCAAGGCGGCCGGGGGGATAC
GTGGCTCCACGCGTTGCGCTACCCTGCCACGCCGCGGGCGAGCTGGGCGACGTCCGGAAT
CTTCAGGCCCTCGCATAAAAGCCTACTACTCAGACGACTGCACTGCACCCCGCCGCTCCC
ACGCCCAAACCGACACACAGGTAGGAGTAAGTACCGATCCTATCCAACCGCCGTCACGTA
GTACAGGCCCCCAAGCTAGCCAAGCCACCCAACGTGCAAGGCTCAACTTTGCACGACCAT
GCAGCCCGCGACCGCGACGGCGACGGTTGTGCCTGTGCGCCCATCGTTGCGTGCCGTCCC
GCGCTCGCTCGCTTCGGCGGAAAGGCTTGGGATGGGCCGTGCCGCGACATGTACCACGGC
GCTCCGCGCGCAGTGCGGCCTGGGTGCCGGGGCGGAACCGGTGGAGGCGCGCAAGGAGGA
CGGACCCCTGCCTCAGGAGCTGGTCCAAGAGGAGGACAAGGTGCTGGCGCCAGAGCAACT
GGAATTGCTCGAGGACGAGGCCATGGCCGGGAAAGACGAGGGGCGGAGTCCCACGGACTA
CGGCCGCCGCGCGCACATCTTCCAGGAGAGCTCCCGGGTGTTCCGAGCACTCAAGGAGCG
CCGTGACGAGGACGGCGGTGCCACCGCCACGGCTCAAGCCTCAAACAACACGCCCCACTC
CTAAGGAAACAAGTAGACTAGCTCCTACAACTTGCTAAGGCCATGTTCGGTTGCAACAGA
TTTGAAGGAAATTGGAATGGATTGGGAAGGATTAAATTCTGTGTAAGTCAAATTCCACCT
CAATCCCCTCACTCAATCCCCTCCAATCCTTTAGTGGGGATTAACCGAACAAGCCTCAAG
TAAAAAGTATCTAGCCATCACGTTTTTCTCATGTATCTAGGCCGATCGCTCGTTTTTCTC
ATGTATCTAGGCCGATCGCTCGCTGTATGGAGGTTTCTTTCACGTCATCCATCTGGTAGA
ATGAATATGATTGCTGAAAACGATGGACGCGATGAACCGTAACATTGGGGAAGCGGCTCA
ATAGTCGGTCGTACATGGTACACCAAGTGTGCGTTGCCGCAATCAAAAAAAAAAAAGTGC
GTTGCCGCCACACAACTGTGAGTTAGATGGCCTACCGAACTTGCAATTCTCACGAAACAT
AATATGTCTGGCTTCATCGAAAAAGCTTTTGAGCTCGGCCTTCATGAATGCCGGTTTTTG
AAAAACCCAAAATTCAGTAAACTTCATATTTTATAATTAAAAAATCTGAAAAAATACAAA
TATACGGAGGCATCTTCAAAGTTCAAAAATAAGAAAGCTCGGCCTTCATGAATGCCGGTT
TTTGAAAAACCCAAAATTCAGTAAAATATTTTATAATTAAAAAATCTGAAAAAATACAAA
TATACGGAGGCATCTTCAAAGTTCAAAAATAAGAACGACGAAGCCCGCGGGCGCAGAAGC
ATGGGGCAAAAAACGAAGCCCGCGGGGCGCAGCAGCATGGGGATTTTGCCCGATATCTCA
CATGTACCCGCACTTTATCAAGAATTCTCATAAGACCATAGACCAACTCCATCGTACGAC
CATATCCTATCCGCGTGCGTCCGAAACAGACGAAACAGATGACCCAACGCGCAGGAGCAA
ACGGACTTTTCTCCGTTTTGTGTCCGCTTTCGATCGATCCATCTCCGACCCAACTTTACG
TCGATTTTGGGTGAAAACGAACAACGCGTGGACGGGCGGGATGCGCACGCGTTAACGGGC
GGGACGCGCACGCTTGTCCGCCCCTGGCCGCCTGTCGGTGGCACAAAGTAAAACCCACCC
CATCATCTTTGACGTCATTTCCTCCCAAAACCTCCCACGTCCCGTCCGTCCCCCTCTCTC
CCCCGTCCATG