| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_185483
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_27691 |
2 |
1552 bp |
AK365854 |
Not available |
Available |
None |
CDS Structure of MLOC_27691
Contig Sequence (5411 bp)
>contig_185483 5411 assembly3_WGSMorex_rbca.fasta
TTGTGCTCGTGTGTCTGCGTATAATGTATGGTATAGGGAGTTATTAGCGGCCAGGTCACG
GCCATCCTCGGCCCCAGCGGCGCCGGCAAGTCCACTTTCCTCGACGCCATTGCCGGGAGG
ATCGCCAAGGGGAGCCTCGAAGGGTCTGTCAGCATCGACGGACGACCTGTAAGATTCTTA
ACACTCGATGGTTAATTACGTTGCGTTCTCATTCAAAAAGTAGCAGCTAGGCTAATTACA
AGAAAAAAAGAACAAGCGGTGCAGCTTCTTATGCTCTAGACTGAAACTTGTTCAGGTCAC
CACGAGCTACATGAAGCAGATTTCCTCTTACGTGATGCAAGACGATCAGCTGTTTCCCAT
GCTTACGGTGCTGGAGACGCTCACATTTGCAGCTGAGGTCAGGCTCCCGCCATCCCTGTC
GAGGGCTGAGAAGCTCAAGAGGGTGTGGGAACTCATCGAGCAGCTTGGTCTGCAGGTATC
CCTTCACCTATTATATAGCATTCCTAAATGAGTGAAACAATAATAATAGTTCAATTTGTG
CTCTGCTTTGCTACATTCCGAACGTTAGTTCATCACAATAAACATCACTTGTGACAACTT
GTTCAGAACTTTAAAGACCTCATGTTTCCAGATTTACTAATTCGATATTCTCCATTACGG
TAGATTGTGATCCAATGCCCTCTCACTTTTAACGCGCAACTGAACCAATAGTAGCGAGGA
ATCGCAACTGAACTCCAGAAGCTTTAGCTTCCGAAGCAAAAGCGGAAGCAAGATAGAACA
CTAATGATCCAATAACATCTGATCCAACGGAACTACATGAAAAACTTCACCTGAGAAAAT
TGTTCAGATTTTTGACAAGCATACCCTTACCAAATGACAGACAACGGCTCACACATACAT
TGGGGATGAAGGGGTGCGAGGGGTCTCTGGCGGGGAACGCCGCAGAGTATCGATTGGCAC
GGACATCATCCATAAACCATCTCTTCTGTTTCTCGACGAACCAACCTCCGGCCTCGACTC
CACTAGTGCATACAGTGTGGTGGAGAAAGTGAGGGACATTGCAAAAGGAGGGAGCATTGT
GCTCATGACGATCCATCAACCATCTTTCAGGATACAGATGCTTCTTGACAGAATTGTCAT
CCTTGCAAGGTGATAAAACTATTCCATTTTATTCAATCTGATGTTCTCAGGCCTCTTAAT
GACTTTCTATTGTGGCTGTTGATGGTTAACTACATTCCGGTCCTATTGCACTATGCTATG
TACTCTTCTAACAAGCTCCAATAATTTATCCAGAGGACGACTGATCTATCTAGGCAACCC
AACCACACTCCCCACATACCTTGCTGGATTTGGCAGACCAGTACCTGAGGGTGAGAACAG
CATGGAATATCTACTGGATGTCATCAAGGAGTACGATGAATCAACACTTGGACTTGAGCC
TCTGGTTGCATACCAGAGGGATGGCAGCAAACCCACGGAAGCTGCGAAAACTCCGGTGCC
GAGAACACCAAGGACACCATACCAGAAGTCAGTTCAGTTCAGGCAAATGCAACTCAAAAG
CAACCAGTTTTCACTTGCAAGCGCAACGCCTCATGCTAACCCCTTCTCAAACTTTGAGTC
CTACAATATTGATGACGAGGAGGGTGATTTCGACAACTCTCTTGAGAGAAAAACACAGAC
GCCACTGCATACTGTGGCCTCGGGGTACCATCCAAGATTGGCTTCACAGTTCTACAAAGA
TTTCTCAGTCTGGGTTTACAACGGTGTCGCAGGGACACCGCAGCGCAGGCCCACTTGGAC
TCCAGCGCGAACACCAGCGAGGACCCCAATGTCAAGCTACCAGCGAAGCCGTGTGAATAC
GCCGCACAGGTCAATTCCTCCATCTCCCCAAGAACCAGTGTTCAAGCTAGAAGAGCCAGA
CTATGAGGAGCAGGGGCTTGATATTGAGCCACTAGATGCACCAGAGGACGGGCCCAAGTT
TGCCAATCCTTGGCTCAGGGAGGTGGCTGTACTTTCATGGCGTACCGGACTGAATGTCGT
GCGCACACCAGAGTTGTTCCTCTCTCGTGAGGTTGTTCTCACGGTCATGGCCCTCATCCT
CTCGACGCTGTTCCATCGCCTCAGCGGTTCTGATTTCCTGACCATCAACCGCATCCTCAA
CTTCTACATCTTTGCAGTCTGCCTTGTCTTCTTCTCCTCAAATGATGCGGTCCCAACATT
CATCCAGGAGCGCTTCATCTTCATCCGCGAGAGGTCACACAATGCATACCGTGCTTCGAC
CTATGTGATCTCCTCCCTCATTGTCTACCTTCCCTTCTTTGCCATTCAGGGCTTCACCTT
TGCGGTGATCACAAAGTTCATGCTCCATCTGAATAGCAGCTTGCTCTACTTCTGGATCGT
CCTCTTTGCATCGCTCATAACAACAAATGCATATGTGATGCTGGTGAGTGCGCTTGTTCC
GAGTTACATCACTGGCTACGCCGTCGTGATTGCGACGACGGCTCTCTTCTTCCTCACCTG
TGGATTCTTCCTGAAGCGGAACAAGATCCCTATTTACTGGAGATGGCTTCACTACATCTC
CGCAATCAAGTACCCGTTTGAGGCATTGCTCGTCAACGAGTTCAAAGGCAGCCATTGCTA
CACTGGCACACAAAATCAGTTGTCACCAGGACCTCTGGGAGAAATCAAGCAAAGTAGCCT
TCACACACAACTGAACCCAAACATCACAACATGCCCCATGATAGGCCAGGATGTGCTCAC
CTCCATGGATATCACAATGGACAGCATCTGGGTTGATGTTGCGATCCTCCTTGCCTGGGG
TGTGCTCTATCGGCTCTTCTTCTATGTGGTCCTGAGATTCTACTCCAAGAATGAGAGGAA
GTAAATAGCTTTCCAACAAAGGCATACCAATATGTATCCCATATATCTTTGTGTGCATTT
GTTATCTTTCTCATTCTCTTTTGACAGAATGCATTTGTTATCTCCTCTCAGCACATTGCT
ACAAGCTTTACTCTATGTAATAGAAAGTTTGCATTCAAAAGCATCAAGTGAAACCCAACA
TCATTCTTTCTTATTTTGAGTAACCCAGGTAGATCCTTAGATGTACCCCAGAGGCTACAC
CGAGCAGCGTTTCATTGTAGGTCGCGATGCAGTCATGCAGGAAGTCAATTCTTTGCTAAA
TGTATTGTTTCATCATATCGAGCTCTTACATATAAGAACCATAGAATATGTAGTTGACAG
CAGCTACTGCTTCAATTATCGAGCTCTTACATATAAGAACCATAGAATATGTAGTCTACA
ATATGAGAAATACTTTTCAGAGATCAAATTTGGAATGTTCAAGTTACTATATTTTGAACT
GAAAATACATAACAACATTGGTAGCACAAGGTACAGACAAACACTAGTAACAAGAAATAT
AGTTCATTTTAGACAGAAAAGCTAAATAATCCTGCAAGAGCAACTTTAGTTTTGATGGTA
AACTTTCATCATATAGATTGCTAAAGTAATTTTCCATGGAACATCAAACTACATACTCCC
TCAGGTGTATGTGCATGCACCAGGACCACTAGAGCACATAAATTAATATATGGTAAATAC
AGAGACAACCAGAATTTCCACACATGTAGGTCAATTTTTATTCATAAGCACTCATTTATT
GAGAGTTGAGTCCATATGAGTACAGCATAGAAGTAATATGATAGCTCACGGTTTAAGAGA
GCCATGCTTCGCAATTTTTCTCTCAAGGCCGGTCTTGTCAGCACCGACAACCTTATCAAT
CTCTTTGCCGTTTATCACACAGGAGAATGTTGGAACACTTGAGACATTCCAGCGGTGTGC
AATATTGCCTTGTTGATCAATGTCCAGCTTAAGGAATACGACATTCCGGTGCTGTTCAGA
TAAGCTTTTGTAAACAGGGCCCATAAAGCGACATGGTCCACACCATGTTGCTGTAAAATA
CAGAATCACAAGCTTCGACAGTTTTGACGCGGCTGTAAATATTTCTTCCAGTTGATTAGA
TGAGTGGATAGTGATCACATCACCTGATAAAACATCACAGAATAATGTGCGAGTCAGACA
CATTAAATCCAGCATCAGTAAGAATATTAATCACTTCACTTTGCAGAGAAAATGTTATCA
GAACACAGAACATTATGGTCTTCAAAAGAAAGCAAAAAATATGGGTAATGTTATTCAGCA
AACGTTCGTTGGGGATGCATGGCAAAACGAACGTTTTCCACGGCAATTTCTGTGCTGGGA
GCATGGCAATTCTTTCAAGCGAACACGACAATTTTGCAGCAAAATTCTCTGTTTGCCAGA
TGTTGCCACATATTTGTAAAGAAATTACATGTGCTTTCGAAGAATTCGCCATACAAAACA
TTCGCAAGCCATGCCCCACAGCGAATGTTCGCTGTCTATTGGGGTCCAAAATATTGTGTG
TACTTACTTCGAACATTTGTATATAAGTCTGTATGGAGATAATATAACAAGTAATTATAT
GAAACTTACCAGGCTTTAGAACAGCAGAAGCAGCAGAAACCTGTGTAACACAATGTGTAT
GAAAACATTAGTATACAGAAGTTTCTTGCGGTATCAAGACAGTCACAACAAAACCAAACA
TGGTTTGAGTATTTGTAACGACCTTCCTATTAATTAAACGAGTTTCAGTCTTAATGATAA
CACTTGGAAACACAGAGGATTTCTAGAGAACTTCCTACTTTTATCAACCATTTGGAAAGA
TGATTACCTCCTCAGCATGCCTACGCTGTCTTTCCAAGTCAGCTTTTTTCATGTCCCTCT
CTTTACGCAGGCGTTCATACTTTTTCTTGTGCTCCTCAATTTTGTGTACATTGGGTTCAA
CCTGTACATGGAATGCATGTTTGAGACATATCCTTACTTAAGCAGACAGGATCAGTGTCC
TCACTACTCTCCTTATCCCCATGGTAGGCTATGTTAACAAGAGTGCAGTAATTCGGAGCT
CAGGCTATGCATTGAAACGCAAGGTTTTTACACTTTCTTGAGAGAGAAAAAAGGCTCCAC
TGATGCCAGATTTTTTTTAAAAAAAATCCTCCCTCCGATCCGAGTTAATTGACACAACCA
CTATACAATGTAAGTAAGACATTGCATAGAGGCTACAGGAGGGAGTAAAATAATTCCACA
TGTATATATATATATATATNTATATATATATATATATATATACTTCACCCCCCTCTATTT
TAACATCAATACACCGTAATTTTACGTTCCGTAAATTTTGTCTTATTTTATACACAAAGA
GAGACCGTAAAAAAATATAATCAATGTATAAATATTTTATGTCACGTAAAATTACGACCA
TACAAAAATAGTGCAAAAAATACAATAAACTCAATTTGTTTTGGTCTTGTGACCTATATT
TTTGTTTTTCT
