Contig Data
morexGenes
Links



Map Locations of contig_184164 (822 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_184164

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_27545 2 469 bp MLOC_27545.1 Available Available LOC_Os01g50030.1, FRAME:-3, EVALUE:4e-39, 13101.m05207 protein CPuORF25 - conserved peptide uORF-containing transcript, expressed





CDS Structure of MLOC_27545






Contig Sequence (822 bp)

>contig_184164 822 assembly3_WGSMorex_rbca.fasta
TAGAAAAGTTAGCATTTTTTACCTTAATACAACAAGTGATAAATCTTAGAAACAGTCACA
GGAAATCAAATAGAATACCAGTTAACACATGCCCACAAAAATTTAGCTTAGATGTTATCA
GTTCAGTCTTTCCGGAACCAGGGTTAACTATTGATCTAACTATTGATCTGGACAATAAAG
GATTACTACAGGCCTATGAAATGCCTATTAAATCAAGGATCGAGACAAAAAACCAGGTTC
ATAAGTGCATTCTCTTACCTCCTCGTCTGAAAGATACATCAGTAGCCAGTTTGAAAATAC
GAGATCAATCGAGTTGTCCTCAATCACCAGGTCTGGAGATGTAACATCAGCACACATGAA
GGATGCATTTTCGTAATGGCCATTTATGCTTTCATTCTACAATGAAAATATATAGAAAAG
AGCTGAGTGAACTAGTCATTTCATGCATGTGGCGATTAAAAGAATGTCATCGCATTTCAG
GCACCCAATATGTTTTCTTAAATCAGGAGTAATTAAATGCTGATACCTTTTTAATCACAG
TTTCAATGAAATCCATTGCAAGAACATGCCCAGCTGTCTTAGCCAGTTCTCCAGTAAAGC
GACCTATAAACATTGTTCATGACAGCATTGGTGGTTTTCATAGAACATATCCTCTTGCTC
TCCTCTTTCCATTCCTGCGCACTACTCTCCACATTGAAGTTGAGATATACTCCAGGTCTG
AGGCCGTTATTGTCATTGATTCCAAGGCCTAGACTATGAGAGTACCCCTGCCTACCCGTG
CTGCCTCGGCCGCCGCCGCCGCCTGCTCCTCCAGGCCCTGGG