Contig Data
morexGenes
Links



Map Locations of contig_183258 (3232 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_183258

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_27448 1 315 bp MLOC_27448.1 Available Available None





CDS Structure of MLOC_27448






Contig Sequence (3232 bp)

>contig_183258 3232 assembly3_WGSMorex_rbca.fasta
GTACCTCGCACTATTGGTGTTTTACTTTCTTATGATGCTTCCTCTTTCCGTCCACATGAC
CAACTCTGGCCTGGGCTTCTCATGCAATCCTTGTTGGGAGGTTTCGAATTTGTAAATTTG
TCAGCCTCCCGTATGTATTAGTGGTAGAACAATACTTGTGATATAATTCCATTCCTTTTA
ATACATGCTTCCAATAGAACTAAAATTTGGGTCGACCAATACCATTCGTGCTTCATTACT
TGGTGTTAATATTTGCATCAGGCCATATTAGTTTACGCTTCTTTTATTTCCCACAATTAT
TTTAGATAGGCCGTGTCATCTTTTCGAATTGTTGCTAGCAATGCTTCAAAATTTATCAAT
TGTGTTTCCATGGTTTTGAGTAATTATTTCAACTACTATGAGGCCATGCTTGTCTGCGTA
CATACCATCTCATGCATGCTTCCATTACAAATCCTTTTTTATTTATTTTCATGCTTCCAA
ACATACTAATGTATGTTTAGGTATTTGCTGATCGTTTTATATTTTCCATTTCAATATGCT
TTCAGTTGAGATGGGTTATGTTGAGATAGTACTGTTTTCATGCTTCTTACATGTTATGGA
ATTTCTAAATTATACTACATATGTTTCTTCAGTGTCCATAGTTTAGTTTCTTACTTCCTG
CTTCTTCTATAAAATTTGTTTTCATTATTATCTCCACTGCAATATGACATGCTCCCGTAA
GATATGACATCTGTTTTCTTGTTCTACGTATTTTGCTTCCATATATTATACTCACACTTT
TTTCATAATTGTCGCGCACTACACTGTATGTCCTGAGTTCACTAGAATGAGGAAACATGT
AGAAGCAGATTATGCTGAAGCGAACGATGAATCCACTAAGAAGCGCGACGGCGTCTGATC
CCACAATGAAGACAAGCTCACGCTAAATGAAGAGAAGCAAGTCTATAGTCTATAGGAAAC
CTATGATATGAACTTAAAAAAACATTGTACCATTGCCAACTTGAAGGAAGCAAATTTGTA
GCATATAAAGATGGTGTACGAACTAACGAAGCATGGCAACAAACTTATGTATGGTCAGGA
GAAAATTAGTTTTACGATGAAAGCACTTTTATACTGGATGGAAGAAATGTTTTCTCGTGT
TGCAAACATAATAAGAAAGATTCATGGGGCTCTGAATTCCCATGTGGAATTCTTATATGC
AAAATTCTGTTATATTAAAGCAAACTTCTTGGACCTATATTTTTGTTAGGGGCAGACAAA
CTTTGATTGCATCAGAAGCAAATTTTCTCGTCAGTGATGCATTTTTTTGTTATGTTCGAA
ACAAAATAAAATGTTACACCTGATGCATTTCTTAAGCATTAAAAGCAAGAAACAAATCGT
TTAATAAAGTTTTCAAAATAATCAAGCATGAACTTTTACTGTCATACGAGACATTCTCGC
CAATGGAAGCATCAGCAAGAACGAACTTTACTACTCGTGAATGCACGCGTTTCGGTAGCC
GTTACTGCTGAAAGCGTGTAATAAGAGCAGTCTCTTACAAACAGACTAACCTTCCCATGT
ATTGATCCAACGTCCATTATGCTACTAATCCAATAGCTAGTGAGTGGTCTGATGGATACA
AGAAAGGGAAACGCTCTCTTACAGACGTCTGGCGTCTAATATTTGTCAGACCTGTCTTTG
GCCGTCGTTTCGTCTTTAATCTAAAGGCTGAGATAGAAATCAAATTCCTGCCTAGTTTTA
TACCCGGTGATCACTCCTTATTCCAAACTAGTAACAGTGCATGTGCAACGCACGTGTAAT
CAAACGAACATGAAATTCAAGTAAGTAATATTTTGAAAAAAAAGAAAAGAGAAGAGTAAA
GGGGAAATACACACCCATAAATTCTGTTTTGGGGATGTCATGTGATTCGAGCACAAAAAG
AAGAAACCATAACTCGTGTATGTCACAGATGAAAGACAATCGACTTGATGAACAACTTAT
CTATAAAGAAGATAGTGGCATAGCCCATTTTGTCTATTGTATTGTAAAAATGCAATCAAA
CGTCAGATGAAGATTTTAAAATGACTAATTTTGTTGGGTGAACTTTGGAAGGAACATATA
AACATTGTCCAAGTAAACATGGTGGAGATGCAAACTTGGAGCGAAAATACAAAAACAAAC
CAGTCTTGGAAAAAATTAATTAGTTCCTTCTTGGATTCAAGTTGCTTGTCATCTTCGTAT
GTTGAAGGCCCGGTGATGGCGGTAAGGCCACCCATGGGAGTCATAGCAGGCACCACCTGC
GAGCTGGAAGAGTATGACAGTAATCAAGGCAGTTTTGTCCCCACTCACTTTCTTTCAGCT
CTTCCTAAAAAGTGGAACTACAGTTCAGAGAGATGCTTGTTACATATATAGTTGTAGAAC
GTGTAGAAATCAAAAACAAATCGATAAATGACGCAGAGCAAAGAAATAGAAATAAAGGAA
GAGGAAAAGAAAACTAAGGTCGGAGCAATCAACATAGCAGCTGGCAATCACCGCTTCCTT
TCTCAAATCAATGGATTCCAGGCGATGAAGCTTACGCCACCAGGACAGGGGAGACACTGA
ATGCTCACCGCTTCCTTTCTCAAATCAATGGATTCCAGGCGATGAAGCTTACGCCACCAG
GACAGGGGAGACACTGAATGCAGAGCAATGTTTGCAACATCAGGATTTGATCGAGCAAAA
GAGTGCCAAATCTGCTTAGAGAAGGAGCAGAGTAGGAGTAAATGCCCTGTAGATTCAGGC
TCTTGGTCGTAAATGGCCTGTAGATTCAGGCTCCAGGAAATTATAACACCAAATGAATTT
TGATGTTTTCGTACTAAAACATAATAAGAAACAAATAAAGCAACTGACGAGTACCATACA
TCATCTCACTACTGACTGTGCATAGAAAACCAGCAGCTTTCAATCAACTTATTCATGTGC
CATCATAAACCCAAAAGCAGTATATTTCACCACAGGCGTTAATTTAAATAACATGATGAG
ATTCGTAATTTAAGCTAGCGTAGCTGACAATGTTTGGAACAGAAACAGTCATACATCATG
ATACCACGTACACGACAGTTCTGCATCTAGAGAGACCGCGAAACAGAGCACAAGGGGCAT
GCTGCTAAGGAAGTACACCTACTATTGTGATTCAGATTCAGCCTAGGACAAGGTCGGAAA
AACTAATCCTCGGCCGCATTGGTTTCATCAGCCGGTCCGTTTTGCTCTTCGG