Contig Data
morexGenes
Links



Map Locations of contig_182546 (2397 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_182546

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_27365 1 876 bp MLOC_27365.1 Available Available LOC_Os04g13480.1, FRAME:-2, EVALUE:9e-22, 13104.m01238 protein response regulator receiver domain containing protein, expressed





CDS Structure of MLOC_27365






Contig Sequence (2397 bp)

>contig_182546 2397 assembly3_WGSMorex_rbca.fasta
GCAATTCGTAGATGCACTAATAGTGCGACCCTGTCAAACGGATGGATGAGTTCATGTCAA
GTTAATTTAACGTGCATGGACATGTCAGAGATATTGGGGTGGATGTCAATAGTTATATAT
AAAGTATTAGTGACAGATTCACAATAGGTGTCAGTAATGGGCTACACCACACTCAAAATT
AAGTAGTAATACAAACTATATACCAATTACAAAATATTCATAGTCTAGTATTTCTCTCTC
TCGAAATGGTACATGACTCACAACATGAAAAATGAGTTAGTAAAAAGCGTTGGAGAAAAA
CAGAAAAGACCTATAGATTATATCGATCAAATATAATCAGAAGTACTTTATTATTATGGA
TAATTATGTTTGGACATTAACATGAAGTTCTCACAATCAAATGACACAATTGAACAAGCA
ACACAACAATGCAGTAAAGCAAACATAGATCAAAAAGTTATACAATATTATGTCCTCCAT
CACTTGAGCAAGCTAACTTTTCCTAGACCATGGCATTATTGTTCTTGTTGATGATGTCCT
GAATGATAGGAATGAGAACCTCCCTCCTCATTGGTTTGGGCACGAAAGCATCAGCACCAA
CATTCATGAATGCCTCCATTGCATGATCATCGGCAGAAACCCCAACAATCTTCACATCAC
CTTCCCCCATAGCATGGATCTTAACAACTGCCTGTCGTGCAATACATAAATTATATTGTA
TTTTTCATACATAAAGGGCTTAATACATGCCGAAGAGTTTGCATATATAATGATATAGAA
CTAAGTACCTCGGGACCAGTCATGATGGGCATGTCCTTATCTAACTAAACAATGTCAAAC
TTCTTCCCCTCAAGGAACAATTCAACAGCTTCCTTCCCATTCACGGCTAGAGTAACCTCA
CAGTTCAGTGCGAGCAATATAGTTGAGAGGACCAGCCTACAAACTTCAATGTCCTCAACA
AGTAGTGCCTTGATAGAGGTGGATCTTTTGGCCTTGAGCTCCATGCTCACCTAAACAAAT
TACAAACACGAATGAATAGATTTTATTATTCATCCACGCATGCCAAATTTGTACTTGCAA
GAACATTCTTATTCTAAAAAAGAATACACTAAAAAATCTTAATATATTACCAAAATCATA
GTTTGACTAATTTAGGACATCATCAAACATGATGAACCAATAAAAACAATGTACATGTCA
ACAACAACAACAACTGAAATTTTGATACACGGATCAAATTAAAATGGATACTTGCACCCT
AGAGTAGTATAAATCCATCTCTAACAATCTCATGTATGTAAAGTGTGGACATAAAAAACC
CACCAGAATACTGATAATAAAATAAGGTAGCAATACAAATAGTGGAACATGTACCTCAAG
GTGAGAGCGAGATGGAGCTGGAGGAGATTGGGGATCTTCCTACTCTTCCTACTTGAAAGT
TTGCAGGTTGAGTGCTGGTACCCCTTGTATGATCATGTATTTATATATGGAAAAAGATAT
GCGCATCAAATGGACAATCTATCTCTACCACCTCCACACACAAAGAAAATCTACGCCGCT
CCGTTAGTATAAACGGGGAAATCAGTATTGGTCGCCAATATTTTGTTATTAATGAGTCAT
ATCCCCACATAAATATTCTTGTGTGATGTTGATACGCAACATAATGCTTCATGTCTAATG
TTTTGTATTAAATTATATATGCTCAAAGTATTAGAAGTTGTGTGAGTTCTAGATCAAAGG
TTTTCTACAGTTTATATTTTAATTTGAGAAAGACATTACAACCCATAAATTCACAACACA
CACACTCACACCTATGAAGGAATTCACATATATACATACCACTAGAAGCACCTACGTAAT
ATTGAGTCAATAGATCTTGTGATTGAGACTATCACCACAGGCACTTCATTCTAAAAGGCA
ACATTGTAGCACTGATAGAGTAGCATCTTTAAGACTCAAGTAAATATAACAAATATACGA
GCACCCATGAGAAGTCTAGACCTTGAACCTAGGTACACTACTAGGAGAAAGCCTACGAGT
AGCGCTGGTTTTTCACTTACCAGTAGCGCTGAGGACACCGCTACTACTAACGCGCTATAG
CTAACCTGTTAGCAGCATCGTTGGATTGAAAGCGCTATTGGTATCTACATTAGCAGTAGC
GCTGGAATAAATAGAGCTCTACTACTAAGCCAGCGCTACTGCTAATATTCCGGCGCTACT
GCTAATATTCCTAGTTTCAATAATTAATTCCCATCATATTTATTGCCCCTCTACATATTT
GTGCATGCTCTAAATAGTAGTTTCATTGTATCATAATAAACATGCATNNNNNNNNNNNNN
NNNTACACATAAAGTAGTCTCGTCATTTACACCTGTTGGAATAATGCCCTAGAGGCA