| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_182159
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_27318 |
1 |
2916 bp |
MLOC_27318.1 |
Available |
Available |
LOC_Os03g53730.1, FRAME:-1, EVALUE:5e-106, 13103.m05874 protein flavoprotein wrbA, putative, expressed |
| MLOC_27317 |
3 |
2560 bp |
MLOC_27317.3 |
Available |
Available |
LOC_Os03g53720.1, FRAME:+2, EVALUE:3e-71, 13103.m05873 protein SRPK4, putative, expressed |
CDS Structure of MLOC_27318
CDS Structure of MLOC_27317
Contig Sequence (3054 bp)
>contig_182159 3054 assembly3_WGSMorex_rbca.fasta
CATGCATATGCTTTGAACTTGCCTCAGGAGATGTGCTCTTTGATCCGCATAGTGGAGATA
ACTTTGACAGGGATGAGGTATTTTTGTTCATTTCCTCACTTTGGTTTCGACTAAGAACAT
ACTTTCAACATTATGGATCTGTACCCTGTTTATCACCTGGTAAATGATGCCCCCATTTTA
ACTTAAGAAAGGTTCTCATCACAATCAACAGCTGACTCTCTGATACCTACATTCCAGTAG
TTTTTCTTCCATACCTTCAATTTACTTCTCCAAACTATACTTGAAAAGCCAAGCCTCTTG
TAGCAGGTTCTTTTTTGTTGCAAATTTTTAATAATTACAGTTAAACTTGCATTGTTATTG
TCATGCTATTATATATTTCTTCTGATTTTAGTTAAGCGTAACATCGCCAATGTTTTAATA
ATAGCTGGGCCTGGGCTTGAAAGATGTACATGCAGTTTGGTTGCTACTGGGAGTGCACAA
GTCATGGCCCAGTATAATTCTGGTTTCTTAGTTAAGCTTTTTTTTAAGACAAGCCCATTG
ATTCTAGATGCACTTTATGAAGGAAATAATAAACTAAATAGTAGACAATGCTATGAGCCT
ATGATGTCAAAAGTCATCTGGTTATGAAGCAGTCATTTTAATCATGAAACAGGCACCATT
AACTCTTTCTTGCAATTTCTGGAAACAATTATTTGTCTTACTATTGCCTCTTGAATACGT
GCGAACTTTACACTCCGTGGGCTGAACTGGATTTTGGTATTTAACCATGATAAGCTAAAG
GTATTTTCAACATGTTTAATAAAGTCACTTTGGCTTCTTTGTGTTGTTGTGATACATTGT
ACTATTATATTGAAAGCTAGAAGATCTAAACTATACTATTTGTTTGAGTTGAGCTGAAAC
TAAATCCTTTATGCTGTTTGTTGTAGTCGATTGACTGCTGCATATTTCTGCACGTAAGTG
CTGAGTTCCACTACATATATATTATTCAAACAGTATGATCGAGTATTCTCTTTTATGATG
CCAACCATGAGACTTTGTTGGAAACACAGTACAAAAGTGGGCGTAGACTAAGACATGCTA
TTTTTTAATGAAATTGTCTGTTTTTACTCTCCTTTTGGAGTTCATTCTAAGCAATTTCCA
CTTGAAGCAGGATCACCTTGCGCTGATGATGGAGCTACTTGGAATGATGCCTCGAAAGGT
AAGGGTGTTTGCATTTTCCTTTTTATAAGCAAATGCTACAATTGTTTGTAGTTTTGTGAT
AGATCCTAAGTTGAATTTCCATTTTGTAGATTGCCTTGGGTGGCCGATATTCACGTGACT
ACTTCAATCGTTACGGGGACTTGAGGCACATCCGTCGCTTGCGGTTCTGGCCTCTCAGCA
AGGTGCTTGTTGAGAAGTACGAATTCAGCGACATAGACGCCATTGCCATGTCAGATTTTC
TCGTCCCGATACTTGATTTCGTTCCTGAGAAGCGTCCTACAGCTGCCCAGTTGCTTCAGC
ACCCATGGTTTGATGCTGGACCCCTTCGACGGCAGCCCAGAGCGCTGGCGGACACGGAGA
ATGATGGTATTCCAGAGAACAAAGGCAAGGAGAATGGTGATGAAAGAGATGCAATGGCTG
CGGAGCTGGGTAACATCGCCATAGATGGTGCTTCTTCATCCAAGACAGTGAAGGATCCCC
AAGCAAGTTCCAAGCAAAAGAATGGAAACGGTACGCCTTCTAAGAGGTGAGGTGCCGCCA
TTCGGTCTACAAGACTCGGTTTTCGGTTCAGATTGCTCCATGAGTGGGAAAAATGAGTGT
TCGTTAGGTTTGTGATGTGCTAGGATATCTACCCATGCGAAAAAGAGTAGCAGGCCAGAC
ATATGTTGTATGAGGTTGGTCGAACAGAATTAGATTTGTTGGGGTTGATGCGGCTCCTGA
CCTTTTTCCCCCGGACATATTCTTTTGTACAATCAGAGCTCCATTTTTTTCAAAGTTGTT
TCTTAGTTTTATGCGTGAACCACGTGAAAGGAGCTCTGGGTTGTGAGGCTGTCTTCCGGC
AAGTTAGTTTTGGCTGTATTCTGCTTAGATTGAATAATAAGGTGCTTGCTGTGTTTAGGG
TAATTTGAGCTGTGGCTACGCCCGGTGATGTCAATCAATAATATCTGCAATCTAATGGAA
GTTCAACACACTCCATGCGTTTTGCAGTGTATAATCTGAATTGAATTCTGAAGCTAGGCT
AAATAGAAATGCTGTTTATGTACAAAACGATGCTGTCCAGCGCAGCAGCGACAGAGCAAA
AACGGTTCCAAGTAGAATCTACCAGATGATGAATCAGGCATCGGCGCCGTGCACCATCCT
CTTGACCAGCGTGGCCATGTACTTGCCGTGGTGCTCGGCGAGGGCCAGCTCCAGCTCGGT
GGGCGGCCTCGAGCCGTCGCCGGCGAACACCCCGGCTCCGTACGGCGAGCCCCCGCGGAG
CTCCTCCATCTCGAACATCCCCTCTCCGAAGGTGTACCCGATGGGCACAAACAGCATGCC
GTGGTGTGCCAGCTGCGTGATCGCCGTCCACCTGCAGACACAGGAGACACCAACGGACCA
ACACGGTTACGGCTGGCCGGCGGCGAAACCACGCGATCTCCCGGCGGCGGCGGCGGCGGC
GGTGTGAAAGAAAGGCTCTTACGCGGTGGTCTCCTGGCCGCCGCACTGGGTGCCGGTGCT
GACGAAGAAGCCGGCGGGCTTGCCGGCGAGGCGCTGGCCACGGCAGAGCGGCGCGGTGGA
GTCGAAGAAGGCCTGCATCTGCGCGGCCATGGCGCCGTACCGCGCGGGGAAGCCGAAGAG
GAACCCGTCGGCGTCGGGGAGGCCGCCGGGGTCCGCCACGGGGATCCCCTCCGCGTCCAT
CTCCGCGGCGGCCTCCAGCGCGCCCATCCGGGCCAGCACGGCGCAGGGCAGCGTCTCCGG
CACGCGGAGCAGGATCCCCAGCGCTCCCGGCACGGACCCCACCCCGCGCTGCACCGCCCG
CGCCAGCCGCCGCACGTGCCCGTACGTGGAGTAGAACACGACGTAGATGCGGAC
