morexGenes - Barley RNA-seq Database

Contig contig_179588

Source Contig contig_179588

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_179588 (1569 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_179588

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_26991	6	1453 bp	MLOC_26991.5	Available	Available	None

CDS Structure of MLOC_26991

Contig Sequence (1569 bp)

>contig_179588 1569 assembly3_WGSMorex_rbca.fasta
AACAAATAATTGAGAGCTTACAGTAGATAAGTAAGGTGTACACAAAAGGAACTGAAGTTG
TGTTGATAAAATAACTTAAGACGCCCAAACATATGGAAAAGCATTTATAACTAACAACTC
GTGTGCATTCTTGTACATTTGATAGTTAACTTAAAATAATTTATCATTGCCGGAAAAGAC
AAATAATCTCTATGAAGAAAAGTGCAAATCAAGATAAGCACATCATGTATGTGCGCTCCT
GTGGTTTCACTAGTCAAAACTTGAAACTGTTAACACAAACAAACACCTCCTTAAGCACAT
TGCAATATAAAAGCCCTAGGTTGCTTCAACTTAGCACCCACTACATCTCAAAAAAAAAAG
CCACGTCTGATTCATGGCACCAAGATTCCGAATACAAAAACAGGCACAGCAATCATCACT
AGCAAAGATCGCTTGTACAATTAAGTTTCCACTAGACCACTACCGCTACAAGTACCAACT
GCCATAGAGTTACAGTTTTTTAACTTTCTCTAACAGCACAAAGTATCAAACCTTTGCAGA
TTAATTTCCTGTTTCTAATGCATGAACACGGCTAACAGTTTATAATCTTGTTCTTCCATG
TTGAATGCCAAATCCATTCTCCCAAGAAAAAATATGATTTACTTTGTTATGCTTCTTGTG
TTGAATCAAATGACATGCCAACAGTACATGCAAACATCTCTTATCAGGTATAATAAGTCT
AGCATTTGGACCCTGCTAGGTATAATAAGTCTAGCATTTGGACCCTTAGACATCCTGTTC
CTGAATAACTTGACGGCAGAATTCAGTTAATTATAGTCTCATATCAGCAACATTCAGGAT
CATACTTAGCTTTCAATGTCCTACAAATCTCAGGACGAAACACAAATTCCTGGAGCCGAT
CAGTGTAACCCAAATTAAACATCTCATTGCAAAGGTAGATATCAAGGCAACAAGGATAGA
TGTACATGGGAGCACCCTTTATCCAACCAATGAGATCAAAAAAAACATGTCACAAGGATT
ATATGCCGTATTTCAGGCGGCCAGTGACTTGGATCCAATCCCATGGAAAGAAAACCGAGG
TTCGTGAAAGAATCGCACTACCTGTGCTTCTCCTCTGTGATTAGCTGCTCTGGCGTCATT
TCCTCCGCATGGTATGCATCGTGCTCCAGACCTACGTACGACATGCCGTGTGGTTCAGAT
CTGATATTTTCAAAGGTGATTTGCATCAGCGATAAGGATTCAGATGCAGAATGGATATCA
AACAAGAAGGAAAGGTGGATCAAAGTACCTGATACAAAGCAGCGCATATTCGTCCTCTCG
TCTTTCAAGAGTTGCGATTCTTTTGCGTTGCCCCATCGCAAATAAGCCGGATGACAATCA
GTTCGATTCTGACGGGCTTGCTGAACAACAAAAACAGAGGAGGGCGATTAGCTTCCTGCT
TCGAGACTCGGATTCAACCAGCAGAGAACCTACTTGCGCTAATGGCGCATCACCGGAACA
GAATGGAAGGAGGGACGGGGGTTACATCCATGCCTTGATGCCGACGCCAACGCCGGTGTA
GGAGGCGGC