Contig Data
morexGenes
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Map Locations of contig_179527 (1179 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_179527

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26988 1 1038 bp MLOC_26988.1 Available Available LOC_Os04g55210.1, FRAME:-3, EVALUE:1e-20, 13104.m05721 protein chloride channel protein, putative, expressed





CDS Structure of MLOC_26988






Contig Sequence (1179 bp)

>contig_179527 1179 assembly3_WGSMorex_rbca.fasta
GACACCTAATTACCGGCTATAATCCAACAAAAGTTAGTATAGAAAATATCATCGTTGATT
GTCTCAGAAAGCTATTTTAGGCACAAACAACAAAGAAAACAAAGCTTAAGTTGTCTATGT
TGTGTAGTGGTGGAAGCTATTGTATGGACAAATTACGGTTGGTGCTTCAAAAACAAATTA
CGGTTGGCAGTTAGTGGGGTATGCTTCTATAAAGCATACTCGATACAATAGCTGGTTATA
TTAACCAAACAGAATCACAAGCAAAAAAGAAAAGGATATGATATCCATGGGCTAATGGAA
ATGTTACATATCAATCGGTTCAGGAGTACAACTGCATTGTACTGAATGTTTAAAAATGCA
ATCCTAGGCTGCATAGCAACAAGAGCGTTACTTTGATGTTATAAATTTTGATGATGTCTA
GATATAGGTGAGCAGTAGCAACAACAACAATAACAGCAATAACAACAACACATCATTAAT
TTGTCATCACTATCTAACATGAAAAGGACATCAGCAGTAATTTGACATCACTATCTAGCA
TGAAAGAACAGCAGCAGTAATTTCACATCACTATCTAGCATGAAAGAACCAGCAACAGTA
ATTTGCATCACTATCTAGCATGAAAGGACAGCAACAGAGCAACATAAATACTTGTTTATT
GTTGGATTAGTCAAGAATTTGGTGAAACTTGCATCTCCTTTAAACAGATGAATATCTAGG
CTACATTGCAATAAGTCACATGTACTGCACACATCAGGTAAAATTAATTCACGCCTCCAA
CAGATGCAAGTCAAGTCAATATTCACACCTACTAAATCACAGTCAGTTCAGTCCAGCAGA
GATACAGTGGACGCTGTCGGTTACCTGCGTGCGGACATGCGGTTGGAGGTGACGACAAAC
TTGGCGCCGGCGACGTTCTCGACGCCGAGGTTGGCAATGAAGCGACAGCGGTGGTGATGG
CGCCGACGAGGAAGCAGAGCGCCCACTTGAGCACGAAGTAGCGCATGATGTGGCCCCGAC
CCTGCGCCCGCCAGTCCTGCTTGAACACGTCGTTCTCGATGAGCCTACAGCCAGCCCCGC
ACGGACAGAGTCAAGATTTTCTATCGCATATGATAACATGATGTTATCTATCTATAAAGA
CGGGGTGCAATCCAACAGATGAAAAATACAATGAGAGAC