Contig Data
morexGenes
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Map Locations of contig_179459 (1920 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_179459

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26973 1 334 bp MLOC_26973.1 Available Available None
MLOC_26974 1 870 bp MLOC_26974.1 Available Available LOC_Os12g38430.1, FRAME:-2, EVALUE:1e-48, 13112.m03958 protein SR repressor protein, putative, expressed





CDS Structure of MLOC_26973






CDS Structure of MLOC_26974






Contig Sequence (1920 bp)

>contig_179459 1920 assembly3_WGSMorex_rbca.fasta
TGAGGCCGTAAATAATTTGGTAACTTGTACTGCAGCAAAAATAATTCGATACATAATTTG
AAATACTCAAAACACAGTAAACTGCAGATTTCACCCTTCTGCAATCTGCAATAGGCAGTT
ACCAGTATCGCAAATAAAAATCTGTGCATAATGGAGCCTTTCCTAAGATTTAACACTGGT
GCACATATGTTACATGTCTGGTAGCACTCTGTCCATTAAGCCTCCATCTAACTGATATTT
CTTTGCAAGGTACTCAATGTTTACTTAACTGGCGGGTGCAAAAAGGTCCAAATTCACATG
CTATGCAAAAGAACAATTATACAAACGCTAAGAGTAAAAAAATAATTTCCTACAAATAAA
GGGTTGCAAGTTGCAACCTGTTAGCTGTAGCAGAGATAATGTATTCTTCTCCGCAGAAGG
TCAAAAAATTCTATCCAAAAGCAAAGTCTAAAATGGGATAAACAGTCTAATAGAAAGCAC
GAATGAAGCTTTCAGAATTCGAGATTAGCATTTCAGAGTACGCAGGACTGCAAATCATAC
AACATTAATGATTCCATTTCCAAAAAAATTACAATGACATAAGAAAGTACCATAACGAGA
ATTACGCCTTTCAGGTTCACCAGAATACCCCCTGCAAAGCAACCAGTGCAAATGAGCACA
TAACATGAGATAAGGAAGAACTTCACAAGAATGGAATAGCATACCTGACTCTAGCTCTAT
TACGCATATCATCTGGCCTTTTCCGTGACTCGGCAGCAACAACATCAGTTATCTCTCGGC
CAAAAAATAATGTGCGGTTCAAGTGATACTGTGCATCAGATGCATCATAAGGGTCAACAA
ACTCCACAAATGCAAACCCTCGGGGCTCCCTGCATATAACGATTCATTAGAAAAGGTAGG
ATAATATGGAAACTAATGGGATAAAAGACAAAAAAGAGGGCATGAAGTATTCATAAAGAA
TGTGTGTGCCTCTCATGTTACCATCATCACAGTTCAAATGCAGTGTGTCCTTTATGATTC
TTGACGAAGCACAGTCAACAACTTACACACATTTCCCATCAAACATGAAGCAAGTGTTGC
AAAACACAACTATGTCCAGGTCCTAGTATCCAAGTTTCTTGTACAAATTTCTTGTATAAT
GACTAAGTATGGTGATCCTCATAAAGAGTATCTTCGTAAAATCATTTGCTTCAAGTCCTC
AATGTTTGAAAAGTCTCAAAAGTACTTGAAATGAACTTTGTTTCATTTAATCTTCTCATG
GACTACCCAATACAACTCTCTTATCTTCTCTTCACGAAACTAACTTTCTCAAAACAAATC
TTTGTCTTCATAAAAGAACTTCTTCATTGGGACAAGACTCTATCTTGCCAAGAAAATTAA
TTGTTAGGAATATAACAAAAATATTCTTCAACAAATCAAGGGACTGTACTTACATCAAAC
CGATACAATCCTGGCAACAATTTCAGAAAATGAACTATCATAGGACATGGGTGAATACGT
AAGACAAGGTAGCATAAGCATTTCCAGATTAGTTAATCACACATTTTAGTGACAAGAATT
AATCACTGAAGCACATGAGTAGACTACAATGACTGGAGCCTTTTCATTGAGCCTAAATGC
TAATGCACAAACATGGTTGCAAACCGACATCACACCAAATCTGAAAGACATGCTCACAAC
ATCTCTTCATCATAAAAATGGTTGGGAATTATACCAAACTTATGAAACAACCATGTATAT
AAGCGTACAAAGTCCTCTTTTTCTATATTTCATATTGTCATTGGAATACAAGGCCAAAAG
TTGTTTGCCAATTGCAAATAAATTATGCGAATACATAAAACCTACCTGGTGTAATAATCC
TTTGGCAGGTACACATCCCGAACAGGACCAAACCTTTCAAAAGGAACTCTAAGATCCTCC