Contig Data
morexGenes
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Map Locations of contig_178146 (6835 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_178146

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26813 2 1615 bp MLOC_26813.1 Available Available LOC_Os02g37470.1, FRAME:+1, EVALUE:5e-124, 13102.m04102 protein tetratricopeptide repeat containing protein, putative, expressed





CDS Structure of MLOC_26813






Contig Sequence (6835 bp)

>contig_178146 6835 assembly3_WGSMorex_rbca.fasta
ATGGTTCATAGGGAAGGTGATCCCACTTCATATGAAGAAGCCATGAGAAGCTCTCGCTCA
TCGAAGTGGCTGGAGGCAATGGAAGACGAGATGAAATCGATGAGTTCCAACGATATTTGG
TACTTAGAAAATATTCCCGAAGGAGCCAAAATAGTAGGCTGTAAATGGGTCTACAAAACT
AAGTATGACTCTAATGGGAATGTAGAAAAGTATAAAGCACGACTAGTGGCAAAGAGAAGG
GATATATTACAATGAGACATTTTTCCCCAGTCTCATATTGGTATTATTTGCACATTTTGG
TTTAGATTTACATCAAATGGATGTAAAGACGACATCTCTAAACAGGGATTTAGAAGAAAA
TGTTTACATCAAATAACCCAAGGGTTTTTATCATGGAAGGCAAGGAACATATGGGATGCC
GCCTGAAGAAATCCATTTATGGATTAAGGCAAGCCTTTAGATAGCGGTATGTAAAGTTTA
ATGAGTCAATTAAAAGATTTGGATTTAAAGAGAATGTCGAGGATAACTGCGTTTATGCAA
AGTTCAAAAATGGGAAATATATTTTCCTAATCTTGTATGTGGGTGATATCTTCCTTGCTA
GAAGTGATGTTAGTCTGCTATAAAAACAAAGAAGTTATTGTCCTTAAATGTTGATATAAA
AGATCTTGGTGAACCATCATATGTTTTGGGCATTGAAATTCACCGAGATAGGAACAACAG
AGTGTTAGGACTATCGCAGAAGGCATATTTAGAAAAGCTTCTTAAAAAGTATAATATGCA
TGCGAGTAAGGCCTCACCTGCTACTATAGTCATGGGCGACAGTTTTGGGAAATTCCAAAG
TCCCAAGAACTAGTACGAGATCGGTCAAATGAAAGAAGTGGCATACACTTCGGCTGTTGG
AAGTTTACAGTATGCACAAGTGTGTACTCGCCCTGACTTAGCTTTTATCACCGATGTACT
CGGTAGATATCAAGAGAATCCAAGCATAGAGCACTAGAAGATGGTAAATAAAGCACTTGT
TATGCGCAATGCGCAAAGGACCTCATGCTAACATACAGAAGATCTGATTCCCTAGAGATA
AGAGGGTATTCAGACACAGATTTTGCGGGAGACAAAGATGATAGAAAATCCACGTCAAGA
TATGTGTTCACTCTCTCTAGAGGGGTTATTTCATGGAGAATCTCCAAACAGTCAATAGTT
GCATTGTCCATGATGCATGCAGAATTTATAGCATGTTTTGAGGCCACCGGGCAGGTGATA
TGGTTAAAGAAATTTATACTCGACTTGAAAGTGGTAGATTGTATTGACAAACTACTAAAG
ATGTAGTGTGACAACCGGCCCGCGGTATTCTATGCTCACAACAACAAGTCGAGTAATGCT
ACCAAAACAATAGACATAAAGTATTAATTATGTTGTGAAAGATAAAATCCAGGATCACAC
TATAAGTCTCGATCATATAAGGACAAAGCGTATGCCTGCGGATCCTCTCACGAAAGGCTT
ACCACCCAATGTGTTCAAAGAACACTTAGCTAGCGTGGGTTTAAGGGAAAGCCTATGATT
CTTGGATCATGAGAGGCCCAAAAGAAACAGAATTTGTTTCAAAACAAAGAGGTATGTTGT
AGCCGTCTGATTCTATTGGCAATTGAGTTGTGACGATGAAACATGTTCTATGTATTGATC
TGTGATGAAACGAGTAAAGTAAAAAAAGTATATGATTAAATGTAATTTTGAGATCAAGGG
GATAATGTTAGGATGATCTCCTCCCGAGTGGGCCCAACGGCCCACCGGACCCTTTGATTC
GTGCCCTCATCGGGGGCGCTCAACCCATTATGGTTCACGGCCCCTGTCACCTGTGCTATA
TAAAGAGGTGGGAGTCAGCGGCAGGCATCACGAGGTTCTTCGCGTTGCCATACACCGCAC
CGACACACCTACCGATCTAGGTCAAGCGCAACAGTGATGGAAAGCACCGCCGTCGCCACT
GCCTACAGCACTGTCGCCACCGTCGCCCTCCACCATGGCCACCTCGCCGGGCTCTGCAAG
CCAAGGAGAAGGTATCCCTTCTTCTCTCATCCCTCTCTCTGTTCTCTCTCACTCTCTCAC
AATGCCTACACGGGTGCGATTTATAGATGAACTACCGGTTAATACCTAGCCTACACGATC
CGACAGATCTATCAATATAGACATAATTTAGAATGTAAGTTCACTCATTTTGCTTCATAT
ATAGTTCGTAGTTAAATCTTTAAAAGGATAAATACTTAGGAACAAAGGGAGTATGTGACA
GTTAGGATACTGTTTTGTCCATACTATGTGTAGTAGCGAACTGTCGTGGCGTCTATTTAA
ATCGATGCAACTCATTGTAACCGTCATTGTAAACGTATGTTCAGGCAATATAAATACCTG
AACTCAACACCAATGAAAACACTCTTTCACTTTAATCTTATTCTTTTCTCTTCAGATCCC
CTGGTAGTTCGCGCGTTCGCTTCAAAAGTTGCTTAATTTTTTTTCTCTTTCTAAGGACAC
GGTGTATGTGTCAAACTATGCGCCCGGAGCCCACGGGCCCATTCATACCACTCCCAGGCC
CTTCCGATTCAGCAGGCACGTGATGAATTGCTCAAGAAAAAAGCGGGCACGTGACGCCAC
CATCCATCCCCAGTTCCCCCTCTTCCACACCTCTGCGGCCGTTTAGCCAACGCGAGGCGC
CGCCGGCGACGGCGATGCAGGCGGCGGCCTCTTGTCGGGGCGCGGCAGCCTACCGCCGCG
CTTGCCACTCTCCCCCGCGCCCTCCCGTTCCCTCTCTTCTTCTACCCATCCGCGTCGGCG
TCGGACGTTTCTCCGGTGAGCCCCTCGTACTCTCAACGCTCCCGATTCTACTATACATAT
ATTCCACTCTGACAGCGTCGTGTCGATTTACTCATGCTCGCGTGAGCAGACGCGGCGGTT
CCGCTCCGCCTCCGATTCGGCTCCCCGCCCCACCCTCGGGCTCGCGGCGGCGGTGGCGAT
TTCGCGCGCCTGGATGCCAGGAACGGGGAGGCGTGGCAGCTGACGCGCGCGCTCGCGCTC
ATCCTTCCCGATCTCCAGGTACGAACGATTCTTTGGGGTTTGGGTTGCCGCGTGCTCAAG
ACAACCAAAATGGATTCTGCCATGGTCTACTCTGTAGAGTTGGTGAGCTGATGCCCAAAC
ACCCAAACAGAGCATTTTGCGTTTCTTGGTGAGAGGCTGTGAACATGGCTGTGGACTGTG
GGATAGGTAGGGACTCCAATTGCAGGCTGGGTTTGTAGAAAAGATACGATTAGCATAGAC
CATAGAGGGATGGCATCTTCTAATCTAAAGTAAACAGAGTTTCTCCCACCCGGGGGAGAC
GCCACTGCCCTGCGCCATGTTTTTGCCTGGGAGCACAGCGAACACAGCCATCATATTTTG
AAGCAATTTTTAGAGGTAGCATTATCACAAGCTTGTTCAGGATGTACAACATTCTTTACT
TATGGGCTGTTGTTTTTTCCGTTACATTGTGATGCAGCACTGCTATTGACTGCCTTACTA
TCTGCCTGTATAATTTATGCCTGCAGAAAACGGCGCATGCCAGCCTGCTGAAAACTGCTG
TTCTTTCAACAATGTCGATGCTCATAATGCCTCTTGAGGCATCAGCGGAGACATGCCAAC
CGACTAGTTCTTTTGCCAATATGCCCATTTTTATTGCTGTCGCTCTAATAGGAGCTGCTG
TGGGTGGTAAGAGGCTCAAACCAATGCCCACGGGCATAACTGATAGTATCTATCATGTAT
AGTTGATGAAGAGAGACGTTTCACGCTGTGCTAATTTTGTTTTCCCTCCTCGATGTTACA
TTCTAGGATTATTAGCACGGCAAAGAAAGGACGAACTGAAGCGATTGAACAATCAACTTC
GTCAGATTAATACTGCTCTTAGGAGGCAGGCGCAGATTGAGTCGTTTGCTCCCGGTCTTA
CTTATGCGCCTGTAGGGAGAACAGGAGAAACTGAGGTCATTGTTGATCCCAGGAAGCAGC
AGTTGGCTGTAAATTTGAAAAACGGGAAGAATTATATGAGGAATCAGGACCTTGATAAGG
CGGTAACGGAGTTCAAGATAGCTCTGGAGCTTGCAGAAAGCATAGGGGATCGCTTTGAGG
AGAAGAAAGCTGTGCGAGGATTAGGTTTGTTTCTTCCTGTTCCTGATAATGAGTTAATGA
CAATCATGCATTACATTGTTTCTGTTCACTGATAAACAAAATTGCATTTAATTAATATTG
ACCCTCCACCATTGTAATTATAATTCTCTGGTTAGGCCACTACAAGGTTGGTGACTAACT
TGTAGAATAGCAGAATGTCGGAATATCCAAAGAAATAAGTGTAATGTCTCATTTTGTTTC
ATCTAGATTGCATTTTCCCCATCCTTACGTTTACATTACTCCTGCAAGCAATTGTACTAC
TGTTCCCTACTTGAATAGATTCTGTAGTGCGCGAAATCAGAATGAGCAATTGTCAAGTAA
TTAACTAGGAAGTAAAACAGCATCCTATTTATTTCAATAGATGGTGATTCTGCACTTTAG
GTGTGCACAGGAGGATTATTATCTGCATGTATGTTTGCTTTCATAATTTGTGGGGCATTC
ACTTTCGCATATACCAGTAATTACTTTTAAGCAAGTACTGATTTGAAATATAATACTAGC
AAGATTTATAGCCACCTAGAATTGATGTATTCTCCAGTTTTTTATCATGGAAATTTGATG
ACCTCGGAAAGCATTACCATTTGTCTGTCTCCTTTGAACATCTGTATGTACCTATCTTTT
CCATGTGTGTTTGTTTGTTCAGATTTCGGCCATGTGCTTTCATTTAGAGACAGCTTAGAC
CAACCTTAATTGTTGGTAAACAAACCACCGTGTGATGCCTAATTTCGCTCCATATTTATT
GTCTCAGGCGCATCACTGCAAAGGTTGGGACAGTACAGAGAAGCAATGAGCTGGTACTAC
AGGGTCCTGGCGCTATCAAAGGAAACCGGCGAGGATTCTGGCTGCACCGAGGCCTACGGC
GCGATAGCCGACTGCTGCGCCGATCTCGGCGATTTGGAGGGAGCAGCGAGGTTGTATGAC
GAGTACATATCAAGGCTGCAGCCCCGCGATTGAGCGCTCGGGCGTTCTTGGTGAGCAAAC
ACTCGGCTTCTTCCTACTTACTGATCATCATGCCAGAGCCCGTCAGTCGCCCTGCTTCTG
ATGTCAAAGATTGCTTGCTTGCTATCTGGCGGAAAATGAGCCGATTTTGCTTGTCTTTTA
ACTTGGCTGGAGGCACTTGAACTGTCCATTAGGTGGCCCTCTCTACTTCTACTCGTGTAT
ATAAATCGCGATGGTGCTACGGCATGTGCGGGTTCAGAGTTCTGTATGCAGGATTGGCGA
TCCATCTTGTTGAAATTTTCCTTGAATTGGGATTGGCGACCCATCTTCTTGTTGAAATTT
TCCTTGAATTGGCTGGTCACTGTGCGGCTTCAGGACTGTATTACAGTGTCATATCCTGAC
ACGTGATACAGCAACAGTTGCACCATGCCTCTTGATCAAGCCCATGTTACTTCATTATAA
AAGGAACTTGAGGAATCAACCTTCCGTCCTCGAGCGTTTGCACTGCTGACAGTGAACAGT
AGTGAGTGATGATCGACTAACAGTTGGCAGCTAGTGCTGTTGAATGGTTGTTTTATTCAA
AGGCACGGAAACAAAAACAAAAAAAATTGTTCGGCGTCGTGCCACCTTTGCACAGCCGGG
CACCACGGTTATGAGTCGACAGGAAGCTCCAACCATTTTTTTAACACGGTACAAAAGCAT
ATACTTTTTTTTGCGGGTATACATATGCATATATAGTCATTATTGTTACAAATACAGTAT
AAACTTGACCGAACACGAGCGCCCGTACGCACGTTATATATAACAAAAAGATCTCAAGTA
TCCTTCATCGTGAGAACGGACGTTTGGCTCCTGGGAGCCATGGAGGCCAAAAAATTTGAG
GAAATCAAAATTCAAAAAATTTAGTTTCTAAAAATTTGAAAAAAATATACAACTAAACAA
GGATGTGACCCGTGTGTGTGTAAAATTTCAGGTCGAAATATTTTGAAACGCGACATGTAC
AAAAAAACAAATTCATGATATGAAATGATGAATATAGTAACATGTGTTAGAAAGTTTCAG
ATTTGTCTTTTTTACACAGACCTCATTTCAACGTATTTTGTTCTAAAAATTTACACACTT
GTGTATTATACCTTCATCTATCTATGCATTTTTTCAGATTTTTTTGAAATATTAAAATAT
GAATTTCCACAAAATTTAAAGTTTGAATTTAAAGGCCTCCATGAAGCTCGGGAGTCAAAA
TCAATTTCCATATAACCATCACTATATATAAATAAGAACCAGGATTTCTACAGTCATAAT
TAGTACCATAACAGAAGTAAGTGAATCAAGTATCCAACTTCTAAAGGAAAACTATCATTG
ACGGTGCAAGATTCATAGTTCAATTCTTCAAATCCTTCTCGTGTTGCACTTGCATATAGG
TTAACCTTTCATAATTCTAATTTTCGTATGATGGTGCAGTTTTTTTATACCGAGCCGAGT
TTTGTCTTGATTAATGCGTTTTTTGCAGAGGTTTTCTTAATACAGTACAGACGTAAATAC
TTTTTTTTTTTTTTGCAGAGGTCGAGCTGGTTCGTTTTGCAGCCCTACTTAGCTGGGTAG
GTTCGCTGAATGAATTTTTGTTCAAAAAAACCACTAAACGAATGTTATTGTTAAAAAAGA
CCACATGCGGTATGAAATGCGAGAAGAGACCTCATTTTTTGTGGCGGCAGGCGCG