Contig Data
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Map Locations of contig_177690 (1017 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_177690

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26745 1 318 bp MLOC_26745.1 Available Available LOC_Os10g27370.1, FRAME:-1, EVALUE:6e-16, 13110.m02351 protein transposon protein, putative, Pong sub-class, expressed





CDS Structure of MLOC_26745






Contig Sequence (1017 bp)

>contig_177690 1017 assembly3_WGSMorex_rbca.fasta
ATGAAAGCTTGGAAGCAATGTCATCAGCCTTACCTCTCTTGTCCTTCTTCACACCATCAG
GTCTTTTCTCATGTTCAAGAGCATCAGTGCGTATCGAGGTAGCATCAGTACGTACCGAGG
ATGCATCAGCCAGATCATTGGTGGCTGTGCCCAAACTTTCATCAATGGTCTTCTTTTGTT
TCTTTAGAGAAGTTTCAAGTTCTCCTGTCTGCCACTTTGGATGCTTCAAAAACTCTATGT
AGCAATGCATCAATGTGAAAGGCTTCTTTTTTTAGGATCCATTTCCTTGAACAAAATGTG
TGCATCGTTTGTCTGCACATACAAATATATGGTTAAAATATGCACAACACATATAGAATA
TTGCACAGCACATATTGGCACATACCTTTTCTTCTATAGTCCTTCCACTTTCTTGCCTAT
TTAAAATCTGCTGAAGGCAACCACAAAATTTAGAGGTATCTGTGTTAATAAATGTGTAAC
GACAATTGATTGCATTACCATTTCGCTCCGGCCATGATGATTCCTTGTGTCTGTTGTAGT
ACTCTGAAATTCTAGCCCAATAAGCATCTCGGTTTTGATCTGTCCCAACAATATCCAAAC
TTGTATTTGCCCATGCTGCTATGAGAACCTTGTCCTCATCACTAGACCAATTTTTTCCAT
TGTTGGATTTTCCTTTCTCTGTTATTGCAGAACGATGCTGAGTTGATGGAGTTGCCTGCT
CTCCAATTGAACTATTTGGTTGTGTTTGTGTGTAACCAAAATCAATGGTGTCCAAGAAGG
CTTGGTCATCATGCATCTGCAAGCAATCCATACATACACAGCTATTTTAGACCACAATCT
GAATCAAATTGACAGGAATAGACAGCTATGTTAGTTTCAGTCCCCTGCTTCCTACCCCTC
CTGTCGCTGTATCTGCTCCCCTCCCATCGATGCATCTGCTACCCCTCCCGTCGCTGCATC
TGCTACCCCTCCTGTCGCTGCATCTCCCCATCCTCCCGTCGCTGCATCTCCCCCTCC