Contig Data
morexGenes
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Map Locations of contig_177617 (3114 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_177617

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26738 1 408 bp AK353559 Not available Available None
MLOC_26737 2 414 bp MLOC_26737.1 Available Available LOC_Os02g10050.1, FRAME:+3, EVALUE:3e-38, 13102.m01109 protein expressed protein
MLOC_26739 1 496 bp MLOC_26739.1 Available Available None





CDS Structure of MLOC_26738






CDS Structure of MLOC_26737






CDS Structure of MLOC_26739






Contig Sequence (3114 bp)

>contig_177617 3114 assembly3_WGSMorex_rbca.fasta
GCCAAAGGGACATGAAGAAGACGAGCAGAGATCCTATTCTCCTGCTGGTAGAGGTGGCGG
CGAGCGTGATGCTGATACTAATGAAAAGTAAGTTCTATTTTTACTGTTCATTTTTTAGCA
ATAAGCAATTGTTATATTATATCCGCTGACATCTTTCAGTCGTACAGGAGCTGTCCCATC
AGAGGTTCGTTTGTTGTGTGACTTAGCTCAGCCTACACCATCCTGGTAACTGATTGTGTA
AAGCTGCTGAAATTTACTCTTCCTCATGATTTTTACACTAATCTGTAGCTGGTAATGTTT
GTAAGTATAGGACGATAAGACATGTTGGTGGCGCCATGAGAGGTGCCGGTGCAGAGCAAA
TCTCAATTCTTGTACGTACAATCATCGAAAGCAAAGCCAGCAGCACTGTGTTGCGTTACT
TCTATGGCATCGGCTTACAAGTTAGATCATGAAATTTTGAAGGTTGGCTTTGCGTTTCGC
TTCCAGCGAGGTGCACAGTTCACCGTGACTGTGACTTCTGCCAACAAGATGCCAAAGCTC
CATGCGACCAATGAAGCTGTGTAGGTCACTCCTGGATCGCTGTGAGTCGGCTCCTGGTGA
AAGGTTCAATTTCACAGTTTTTTTGTCCAAATGGTCTAAGCTTTGGAGAGAACCTCATGC
ACTAAATTATCTACCATTAATTTTTTTGTATTTCCTGTGAATTGTTTCTTGACCGGATGC
AGATGAGCCTGGGCTGAGAAATGGATAGTCGCCATCTTCTTATACTTTACTGGACTCAAA
TTAAATGCCGAGTGCTTCTGTGTCCAATAAAAAAAACTGTCAAGGGCCTCAAGGCTTCAT
CCTGAAGACTGGAAAACTGAAAACTGCAATGGTTTGTGTCTTTTCTTTCGTACTAAGTTA
CTTTCCATTGTTTAGACGGTAAAAGTATGTCACCTGTAGAAAAGTAGGAGTGTGAGACAT
TTGTTGTAGAGGTTGAAGACTTATGATTAAGCCGGTTACTATTGTGCTTTTTAAATGGCG
GATCATTCAGTTGGCTGTTGTTTGTGCAGGGATATTTTTACAGTGATTCTCCACTTTATT
CGCATGTTTGTTTGCCAATGTTTGTGCCTTGTGGTCTGAGGGAAATATATATGAAAAAGA
AAGTTAACTACCGGTGTCTTTATTAAATTTGTTGCATTTTCTTAAACGAAATGAATAAAT
CCGCTTTGATGATTTAACAATTATGCTCCGAGTTAAAAACCTTCCAAGCTTGTTTCTTTC
ATTTGTCATTTGGAGTAGAAGCCGGATTACAATGTCCTAGGAGGAAAGTGCAACCGTGGG
CTCTCTGTCATTGGCAGCTACAAGACATTGAAAGGTGTCGATGTTTTGAGCAAGGAGGAG
ACGTTTCTTGCCTGCACCCTTGGTTGGTGTATTGAATGGGTAACACTTTCTTCTCGTTTC
TTTAGATTATTTTTTTAGTTATAATAGCTGAAAAATCAATCTTCACATGGCACCTTTGAT
GAATCTTGATCATGTTGTAGCTTCAAGCATATTTTCTTGTGCTTGATGATATCATGGACA
ACTCCTAGACACAACGGGGCCAGCCTTGCTGGTTTATGGTGCCTCAGGTCAGTTTAAGAA
GCATTAACCCTTTCTATATCATCTGGCAACTTTGTGCACTTATTATTTTGTTGGTTGTAT
CAAGGTTTTACTTCAGAAAGGGTTCTCCAGTAGAATTAGTTTTAGCAGCATCAATATGAT
TCATCTATTAAACAACCTAATTTCATGCTTCATGTTTGTACTTGATCCCACAAGAGAAAT
GATTTATAGTATTGGCAGGCTGCTGTTACTTGCTTTTTCGAGAACAAGCAAGTTCTTTCA
TGTTTTCAGTTGTAACCCACAAAACCAATCGCCTGTTTTTTTGTTGTACAATAGGTTGGC
CTTATTGCTGTAAATGATGGGATTATCCTTCGCAACCATATTTCACGGATTCTTCAACGC
CACTTCAAAGGAAAACTGTATTATGTTGATCTCATTGATTTGTTCAATGAGGTAACCATA
TCATGTGACATACATATACATTCACACCAAATGTACTTTCTACTTCTTACAACTGTCTGA
TACTCTAATTTCTTTGTCAAGGTTGAGTTCAAGACATCTTCAGGGCAGTTGTTGGATCTT
ATCACTACTCACGAGGGAGAAATGGATCTCACAAAATGTAACTTGAATGTGTAAGTTCAT
GTTGCAGTAACTTTTGCACACTTAGTTTCCTTGCATGGTTTACCTCATTGTTATAATATC
AGTGTACACTTTATTTGTCTGGTAGTGAATTCCACCTACAAGGGCCGGTCCAATGCTAGA
ATAGAAGCAAACTTTAATATGTGTTCTCGTTACCTTGCATGTCAACTACGATTGAGCATG
AAGCCTTTTCATGCGGCCCAGCAAATGTACCAACATAGACGTGCTTTCCAGTGTATAACA
TGCTTACACTTATATTCCTACAATTAATTATGTTCGCTGGTAATTTGTGCACATGGTCAG
CTTCAGGATTACACGGTTTTCTGGCTTGCTGCAGTATGGTTCTGAGCTAAAGTTTTTAGT
AGTGATTACACTTCCTAGCTATGATTCTGAAAAATATGGTGTTTTCTCTAATATAATTTG
CATGTTAACATTATGTGGTCGTATTTGTAGGCTTGTGCCAATTACTGTATACTATACCGG
TTATAGAACAATTGGTAAATACTCTTTTTTCAAGATGATGTCTTCTTAATTTGTAACAAT
GGAATGGTGTACCATGTCTGATACATTTTACTTGAGACGAGTATGTGAGTAGTATTTCTA
GAAAGATGATAGATCGATAGTTGAATGCACTTGCACACCATCATTTATTTATGCAGGCCC
ATTCCATACAAGAGCTGGCAAAAAAGGAGTTTAAAGAAGATACACAAAAGGGCATACTTT
TAGAAAACCAAGTAAAGAAAGAGCAGAGAGAAAACTGAAGTTATATTTGGTGTCGCCAAA
TAACAATAGTTGAGATTACCTTCAGGAAGAAATTCCAAAGTATATAAAAAAGCAAGGAGT
ATCAAGCTTGTAAAGTTATATTTGGTATTATCCTTTGCAGAATATAAGTCATAT