morexGenes - Barley RNA-seq Database

Contig contig_1771266

Source Contig contig_1771266

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1771266 (2614 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1771266

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_26659	4	887 bp	AK361466	Available	Available	None

CDS Structure of MLOC_26659

Contig Sequence (2614 bp)

>contig_1771266 2614 assembly3_WGSMorex_rbca.fasta
TGGACAGGGGTGCGTGGAAGCTTGCTATNNNTGTGCCAGAACCATGAGTTGGTTGTTATA
TCTTATGGGTTTCACCTCTAGCNNNNNNNNNNNNNNNNNNNNNNNAAGGCTTTGTTGTTG
TTGTTGTTATCGTTGTTGTTGTTGTTGTTGTTGTTAACTAGACATCTGGTAGTCCTACTC
TTAAGATGCCATAATACAAATAACCTCACATATACAAAACCATTCAAACCATAAAAGCTG
ACGAGATTTTCAGTACAACTATTGATCGAAGGCAAGAGGATATGGTGCTTCATCTGAACT
ATAATAACTCCAAAAATAGTAAAATACACATCTTTGATGCTTGATACAAGCAAAAGGTCG
CCTAGAATGACTTCTGCAATCAATACGGGCAAGAAAATAATATCGATTGGATAGCTAAAC
CAAAACCTTTTGCACAATTTTAGAAGAAACATACTCTCATAGGCAGTAGATAACAGTGCA
CTTACCAGAAAAATTAGGAAAGTACAAAACGCTGCTCAGATTGTCGAGTCCAGCTTGTTC
CACCTGGCTCTTGAACCAATCAATCATTGCATATTTGGAGATGTCTGCAGGAGGATCCCA
GTATCCTCGGATGCACAACACATCGCCAATTGCTATGAGCTGGCACAAAGCAAAAAACCA
AGGTGAGACATCTAACAAGTAGCAAATCGTGCTAGACATTATCACACAATTGACAATTTC
GTAACAAGCAAACATTGCTGCCCGTGCAATTGCTCCATAATCCATATCTTTAACTCCTAC
ATAGCACCCTCACATTATCCACTACTCATACACGAATAAAAGAACCGATAAAAAATGTAC
CAAAAAAAGGAGCAACCTCAACCAAAAAGTACATGACTTCCTAGAGTGCGTGAAGTTAAT
ACTTTCTGGATTTAACTGCTTGTAAATAAAATAACACAATTAGACTGGTAAGGTGAAGAT
AATGTCAATAGATTTATCATTGAGATTAATTTCACAGTATAGATTTCGTATTTCCATTAA
CATATCATGATACATGTTGGATAACATGTCAGTGTCTAAGACATCATCTATTTCCGAATG
GAGGGACTACTAAATACACCAGAAAGAAGCAAACTCAACCAAACACTACATTGGAACAGT
CCTAGGGGTTTTCTACAGTAACTCAATTTTTTCCTCTGCGATTACTATTTGCCGGCAAGC
CAGGATAACATGGATTAAGATTGACAAAACAATAAGGCACGAGACTATCAGATCCACAAT
GCTAAATATTTAAGTTCATCAAATACAACAGCTTGAATCTGAATCATAAGTACCCGGGAA
AAAAACAACTGCTTAAGGCATCACAATTCAGTCAGCTCCCACCGAAAATTTAATACTGAT
TCAAGTCTATACGGCTGAGAAACACCTAAATACATACCACTGATGTGGTGTTTGTGTTCT
GAAGCAGAACATATGTCGCCCAGGCCATATCCTCTTTCTGCGCCGTTGACAGATCATCAG
GAATCACAAACACCTGCCTGCTCCCTTCTGGCAACGGCACACGGCTGGAAGCACCAGCAC
CCTACAACAATCAAAATTCCCAAATCATCCTCATTTCCCAGCATTCACCGCGCGAACCCA
ATGTACCACTCCGGCCACACAATGACGCATCCCACCTCTAGGAAGCGCCCGAGGTACGGC
AGCGCCGCTGAGAACGCGGCCAGGCACAGCCCCAGAGCCTCCGACCTCTGCAATTTCGCG
TAACCGGTTAATCAGGCATGTGAAATACGGTTGGGCATTATCAGGGCGAAGGTACAGAGG
TAACAGACGAGCTGCGCGGGAGTTGGGGACGGCGAGAGGAGGTGGTTGAGGAGGACGAGG
GCGCCGAAGCCGAGGCCTATCCACCGCGGGAGGTACGACTCGTCCAGCCCGGGGATCCCT
GCGATGGTGCCGCGCCGCGTGTGAGATATCGTAAAACGCGCCCTTCGAGTGGTTCAGAGC
GACCAGCTCGGCGGCGGATGGAGGCCGGGTGGCAGGGGAGGAGGGTACCGAGGGTGAAGC
GGAGGACGGAGAGGTTGACCTGCTGCGGAGGGTCGGAGTTGGAGGCGCGCACGCGGACGC
GTGCGGAGAGGGAACGGCGGCGGGGTGTGGGTGCGATTTGCCGGACGAATAAAGCTTGCG
CGGTGGTGGGGGAAGGCTGTAGGTGGAGAAGAAGCGGCGGTGCACGGACCAGGAGAGCCA
TGGCGGATGGATGGTGGCAGGTCGCAGCGGCTGCGCTATGCGGCTCTGCGCACCCTCAGG
TTACAAGGCCCCGAATGTCGCAAATTGTGGCCCACGGGTACGGGAACAACAAGTCCAAAG
GCCGAAACGCCCAGAGCGCTCAAGCCTCCCGAGGGTCGTTTAAAATGGACTGACAACGCA
CAACTGCGAGCTATCAAAATTCAAAAGTAAGGTTTGGATGATCTTGAGGGATGCATGGAA
TAATACAATTATGACTAACTAAATTATTTATGATTCAGCTTGTGTCGTACTTAGAAAGAT
ATCCATGTACCCTTGCGGGAAAACCCTGATTTCTACAAACCATTGTCAACTTATCCGGAC
AAGATACTTGAGCTACAAATACCCTTTGAGTGGA