Contig Data
morexGenes
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Map Locations of contig_176327 (2045 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_176327

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26547 1 594 bp MLOC_26547.1 Available Available LOC_Os05g05680.1, FRAME:-1, EVALUE:8e-35, 13105.m00599 protein 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed





CDS Structure of MLOC_26547






Contig Sequence (2045 bp)

>contig_176327 2045 assembly3_WGSMorex_rbca.fasta
GAGCCTCTCCAGTGTCTGCACCGGCTCCGACGACCGGAACGCGGCCTCCCGCAGGCGGTA
GCTCTCGGAGCACACCTTCTTGACGCGATCAAGAAGCTCCAAGGGGATGCCGTGGTTCAC
CAGCTGGAAGAAGCCCCAGTTCTCGCAGCCGTCGGCGATCTGCGCCATCGTCTCCGCCCT
CTCGGCGCCGTCGAGCTTCGAGAAGTCGATGACCGGGACAACCATGGTGAAATTCTTGGG
CGAAGATGAGTGAGAACTGAGAAGCTAGGTAGGCTCTGATCTGATCTCTCTACAATGAGA
TGGTTGTTATCTGCAGGTGCTGGATGAGATGGAGTGAGTGAGAGTCACTGGCCTTTTTAT
AGGGCTCGCGATGCCCCTCGAGACATTTATTCTCTGAATAAAAAATAAATGCGAGAAAAA
TTCTCTGCATGTGCCGGAAAGAAAGAAGTTTCTGCGAGGTAGCTGGCTAGATTGCAATGT
TGGTTGGATGCTCATGCTCAGTTGGATCCGGCAAATGAACAGAGCAGACCACCAGATTGA
TTGGTCATATCATTGTCAAGGACTTCTCTGAACAAGAACAAACCTGTCACCGTCCATATG
ACTTTCTGTGAAGAACCGTAAAGTGGCCAACTCCGGGGTCTGGTCTCTGAAGAACCATAA
TAAACTATCAGACGGGATTCCGGAAAATAAAATGACAACTAACAGACGACGGAATCGTAC
TACAACCGATATGTGTATCAGTGTATGTTAGAACAAGTTGACCAGGAAAAAAAAGTTGTT
CGGGAGGCTTGACCGAGGATATACTATTCTTTTGCCAGCCAAACATATTTGGCCTCCTTT
TGTTTTGAGGAATCTCATAGGAATTCTATAAGATAGGATTTTTGTAAGATTTTTTTAGAG
CCCTTTGGTTCGTAGGAATGAATTCCTATTCATACACAGGATTGGTTTTTATCCTTTACG
TTTTAAAGGAAAATATACACGAGCCAATATTTAATAAAAAATTCCTATGACGTGAACCAA
GTGACATCTTCTTTCCCAACCCTGTTAATAGGATTTGACATACATATCATTTCATTTTTT
TAGAAAATTTTCTATTCCTATGATATTCATCAATTGAAAACACTAGAAGTAAAACTTACA
TCTAGGTCTCCAAACCACTCAATGATGACTAAGGAACGGAGCAAGCCAAAGGCATACCGC
TGTCATCACCCTCCCACGTCGGAGCCAAGATTTTCTTTTTCCCCTTAAATGGAGGCAAAA
TGTTTGCCTCATCCGGTAGTTAACAAAAAGTTTAGAGGTATTACAAACAACACGGAATGA
CAATACATAGTCTCACTCTTCTGACATTAGTTTACCCAAATGTTTGTCACCTGCAATACT
CCTGTCATGGTATTTTCATGGCAGATGCTAGAGGGTGCCTTAGATCGTGGTTTGAGGCCG
ACAGGAGTCGACGGCGTCTGGGAACGGACGAAGGCGCAAGACACATGATGCCGATCTATC
CAGGTACAGGGCCCTCCGATGAGGTAAAACCCCTAGTCCTGTCGGTGTGACTATAGGTGA
TCACAGTACAATGGTGCTCCTTGAACTGTTCGTGAGGAAGGAGACGGGGCTCTTGATGTC
GGTCTCGCTACCTCTCTGGTGTGTTACGTGGGGGGTTTTGGTACTCAGGTGTACGCCAAC
CCCTTTCTTGGGGGCTGGGGGTTGGCTTTATAGGCTAGCCAGGAATGTAGAGTAGTGGGA
GAAACAAGGGGACGGGGCTCGGCTGTCAGCCTCTTCGACTGGCCGCGGGGCCCACCGGCT
ATTGGGTCTTGTCCGACGCGAGGCCTGCCGGCCGAGCGCCGTCAGCACGCCGGCCGATAG
GGAGTAGGTAGGTGCAGGCATGGCAACAGGGCCGCCTCACCCGGTCAGCCTCGGGAGTGA
CCGGTGGCCCTATAGCCTCGCTCCTGTTGGAATTATGCCCTAGANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTCCTGTATCAAGATAATCGTTTATTCACCATGCTATAATTGTATTG
AATGA