| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_176268
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_26533 |
1 |
360 bp |
MLOC_26533.1 |
Available |
Available |
LOC_Os04g54300.1, FRAME:-2, EVALUE:6e-13, 13104.m05612 protein wound induced protein, putative, expressed |
| MLOC_26534 |
1 |
764 bp |
MLOC_26534.1 |
Available |
Available |
LOC_Os04g54240.1, FRAME:-3, EVALUE:3e-30, 13104.m05607 protein wound induced protein, putative, expressed |
CDS Structure of MLOC_26533
CDS Structure of MLOC_26534
Contig Sequence (5502 bp)
>contig_176268 5502 assembly3_WGSMorex_rbca.fasta
TAGTTCCAGCGGCAGAGGCCGGCCTGATCCTTGAGCGCCTCCACGGCGCCGACACTCATC
GCCACCATCCACGATGCCTTGGCCGGAGAAGCCATCTCTTCCCCTTGTTCTAGTGGACTT
GCGAAGTTGCGCTACTGAAAGAACAGAGCTGGTTTTCTTGAACTATCTCACTGAATTGAT
GCTTGTTTGTGTTGATGGGAGGAAGAGTGGGAGTTGGCCGGAGTTATATACGGGAGAGCC
GGAGCAAAACTGCCGGCGGCGGGTGCTGGTTTTCCAGGATACCGTGTGCTCTCAGGACAG
GAGAGTTCACTTTTGCACCATCGCTTGCTTGCGCCGCATTTGCTGTACAGTGGGCCATGG
TTTTGTCTGCTACGACCAGACAAGGCAGAGAGATAATACTGTAATAAGAGTAGATAGGTG
TGATGCATATGAGATGGAGGACATGGTTTCCACGATACCAGGGCCGTGTGAGCTTCGTGT
AAGTGTGTATATTATAAATACACCGATCCGCTTGATTGCTTTCAACAAACTCGTGGTACT
GATACTATACTGATACTAACGATGATGTATTATGCTGTTGCTATTTAAAAAATCTGGTAA
AAAAGGATCTCATAGCCTCGTTCTTATTATAAAAAGGGAGTAGCTAGAACTCATCTAGAT
GAGATATAATTTAATTTTATTCACATGAAAAATATAAATAGATAAAACCACATCAACACA
TATATATTTAAGTATCACATTCAAAGGTTATATAAGATGAATGAAATATAACTATAACTT
AGTTAGATGAGTTCTAGCAAAACCGTTATAAAAATGAAGTCAACCAACGTCCAAGCCGAG
CCATTACATTACACCAATTTAAATACATACACGCCGAAGCAACAAAATAGACAACCTACG
TCATCATGTATCTAAACTATCGACACACAATGCTAAAGCAACAGATTCATAGGAATGCCA
CCAAAAAGTAACCACAACTCTGAATATCACGGGCACATCAAATTTTTAAATAATTTTGAT
GAGCTTTAATGCTAACTATCAGAAGATGCATGAATAGAGTCTCATCACATTGTGTCTCAA
AGTCATCTTTCTAACATCAATTCTAGCTTTATTGTTCTAACCGGCACCTATCCGATCCCC
TAAACCAAATAGAGGAGTACAATTTTTACTCTGCCTCCTATTCGACTCCTAGTTATACTC
GGTCGCCTATCGCTGGAGCAAAAAAAATGCTTCCCCACCCCTCGCTTCAACCATCTCGTT
CACATGCCTCATCTAAATCGGCACCACGCTTCCCACCCCCGCCAGCCACCATACGCCACC
GTGGACACTCCGAAGGCCCCGTCGCGGTTCTCGCCCATCGGATTTGAGCCTTTCTCGCCA
TCGTTGGCGTAGAAATCATCAGATCTACGACCACCGCAACCGGCTGCGGCACCTTTTTCA
TGGACTGATCGGGTGCTGAACCGCACAACCCCGACAATGACTCTGCACTACATGTAGCTA
CGGATCCTTCTCTAGCCGCTTGGATCTCACTCGTCGGTGGTTCACCGGAAAGACACATCT
GGTCGTCGGTCCGGCTCGGCACTGGCCCAACAACTCGTCGGCTCTCCATTGCCAGTCATA
AAGAGTGGCGACTGCCCGCGGTAGGTGTTGCGTTGAGTTTGACAATGTCGGCACACTTTG
GATGGGTGTTCTTCAAGTGCAAAAAAGATAAGGTGACTTCTTGTTTTGATTCTGTAGTTA
ACAGGATTCGATGAATTTGCAGCTCATGGTTGCTCAAAATTGTGTAGAATGTATGCGAAT
TTGGCACCGGGAAGAAGATTACATTGATTTATTGATAAAGAGAAAATTTATAGATGTTTT
CGTGCACTCTTTGCTAGAGTAGAGACTAGAGATGAGACTAGATGCTACACAATGTTGAAT
TCATCGTAACCAAAGAAGAAAGAAGTGTAGGTCGATAAGCCAATGAAGAGAACCAACAAT
CAGAACATCGTGAAAATATTAATCTAACTAATGAAAGAAGTTATGAAAAATTGATATGTA
TTAAAGTGTCCAGTTATGGTTACTATTTTCTTTGGTTTCGTTCTTGTAGCGATGCTTGTG
TTCATGGGAGGAGAGTGGGAATGGGACGGGCACTATATACGGAATGAAGTGGGAGGGAGA
CAAACCTTTGGTCTATGAGTGTATATAGATCATATATATAAAAAAGTAGTCGAAATATTC
TGAAAATATTTTTAAAACAAACTTGATCTTTCATTGTACTTGTAAAAAAATTCAAAAAAG
AAACATTGAATTTATAAAAAAACAAATTTCAGTCAAAACAGTGTCAATTGTGACCGATAA
TAGCAAATAATTTTGTTTTCGTTTGCCCTGAAGTCAAAAATTGATTTTTATTCATGAAAA
TCCACATAAAAGTGCAAACGAATCAATTTTATTCTAGAAAACTTCTTTTTTTTAACTTTT
TCCAATTCATTAAAAAAAATCTTATATCAGGTGTATACACACCCAGAAATCAAAGGGTAT
TTTCACGGAAGGTAGCAAAACAGTTGACCGCGGGCGCTGGTTTTCCAGAATACCGGCTGC
TCTCGATATCAGTTTATAGGTTTTCGCCGCAGCTCTCGCTGTCATCCCGATGCAGTGGCA
GAAGGGGGCGGTTTTGTTCGTTACGACCGGACAAGGCTGGCACTGGCCGAGACAAGATAG
GAGTGACGCACATACTGGAGAACGGACATGGTTTCCACGATACCAGGGCCAGCCGTGTGC
TTATTTCCTTTTTCTTTCTTTGGCGACGCGGCCGTGTGCTTCTTCGTGTCAGACGCGTTG
ATTAGAGCACGCTTCCTATCACCCCGGCTTTCTTACTCTTCCTACTATCACTCTGATCAC
AGAAACTGCAGCAGCTGATCAGGACTAGTTTATGTATCTAATGGGACTAACCAAGCAAGC
AACTGAAGCCGGCCCCACGAGCAAAACTGAAACTAAAATGCTGATATAAGAATTTCTCAA
GTGCTTCAGATCGACAGAAAAACATAAATTGCGTGTAAGTTGTATAAGTTCTTTTCTCGG
CCATACAGAACCAAACCTGTAGTCTGTAGTCTGTAGTCTGAAGCCAAACCAGAACATCTA
TGCACAATCCTCATCATCAAGATAATCAAAAAGCAACCAGACAAGGAGCAATATGAACTC
AAGTAACATCGTTTTTCATCATCATCATCGTCATCGTGGTATTTTACAATGGGGGGTTCT
TCCCAAGGAGGCCAGCCAGGTTTGAGGACATGGTTGTTTCAGGCTTTCACAAAAGCTCCT
CATGCATCAAAGGCGTCATGGATGGAGCTAGGAGAAAACACCTCCTGGCTCTCAGGTATC
AGCTACTACTAATTGGGACCCCAGCAGCTGAGGTACATGACGGTCCTCAGCCCCTCCTCG
GCCTTCTCCGCCATGGCCGAGGCAGAGGCAGGTAGCTGCTTCTTGCCCTGCGACACGCTG
GCTCGCACGTTGGCCCTGGCCTTGGCAGCTCGCTGGATGGACTTGAGCGCGTAGTTCCAG
CGGCAGAGGCCGGCCTGGTCCTTGAGGGCCTCCACAGCGCCCACGCTCATGGCCACCATC
CAAGATGCCTTCGCCGCACCCGCCATGATCTCTCTTTTCGTTGACTAGTCGGACTTTGTG
GATTATGAATGAACTGGGCGGAAGGCTGATTGGTGTTTGTGTTGAGGAGAGGAAGAGCGG
GGGTGGGAGAGGTTATATACAGGAGGGAGGCTGGTAGGTCCGGAGCAAAACAGTGGTCGC
AGACGTTGGTTTTTCAGGATACCGGGTGCTCCTGATGGGTCACTTTGTTGCTACTCTGCT
CGTTCAGGCCCAAGTATAGCTGTTCGTGTCCTTTTGTTTATCGAAAATGCTAGACCTACT
AAAGCCTACATAAATTTATTAAACCTTCCAACTAATCTAAACATGCCTCCCCTGATTTTC
AGGGGTGGGTGGGCCTCATCCTCTTTTATTGTCAAGTCAGACTATTACGTAAACGTACGT
AAACATTTACGTAGATGTAGCATCGCTCTTTGTTTATTTGGAGGTGGAAGTGGCGGTTTT
GCACATTGCGAGAGTATGGGATTGATGCAAGCCCAGATAAGAGCAACTCCAATGCGCCCA
CGGAAACGCCTTTTTTCGGTTTTTTTTCGTTTGGATCGACCGCTTTTTCGAACTGCGTAC
GTCCTGTTTAACATTTAAATCGGTGATGCGTCCATTTTTTTAGCAAATATGCACATATTT
TGCATTATTTGATAAGCGGACATATAAAAAAAGATAGTTTTACAATCAAATAAAAAATAA
TTTTAAATAAATAAGTATAGTTTTACAAACCAAATAAAAATTAAATTGTCTCAAATACAT
GTGAAAAAAAGATACATCTATCGGTTGCCAACATGAACCTACATATGCTCAATCAAATCA
TTTTTGTATTTGCATGTGAGTTTTCCAATCACGCATTTCATAATAAAATTGAGCGAACTG
TTCAAACATTATCACTCCTCCATGCTCACGCACAATATTCACACCCTGAAACTGAAACCC
TCTTCTTTTCCTCTCCCCCACTTCTAAAAAGATTTTTAAAAAATACCAAAAAGATTTGCC
TTTTTATTCACCCTTTTTTCGTTCGTCATTTCGTTTGCTTCTCGTTTGCTTAGGTGTTAG
ATTGCTTAAACTCATGGCTGACCTTGCTACTATTGCTAGTATTCATGAGAATGAGGTTCT
CAATTTTAAGCAAAGGGAGGGAGAAAACTTAAAAGANNNNNNNTATAGAATTTGCAATGC
TCAAAATAGATCTATTCACACGCAATCTACTACCGTTCTCCTTCATAATTTTTATGTGGG
TATCTCTCCTTGTAATAGATATGTTTTGGACACTATTATGGGAGGAAACTTCTTGGGTAG
CCATACCTTAGATTCTTATAATGCTATGACAAATATGGTAGGTTCACCCCCGCTCATGAT
TAATGAAACAATCTTAACCTTGGAACATGTGATGCGAAGGCTTGATGTTATTGAAGATAA
AGTTGCTACCATTGAGCTCATTAAAAACTTGGACAAAAATATTCATAATCATATTACTCA
ATTTGGATCTAAGGTAGGAGTTAGTTTAAAAAACCTAAGGGAAAAGGAATCCATAGTTAA
CGAAAAAATGGATAAAGATTCTTCTAGGATTGGAAAGCTTGAGGACATTATTACCAACTT
GTGTTTCGTCTTTGCCTCTATACAAACCACTCCTCCTCCTAAGACTGCCAAGTTTATTTA
TGTTCCTAAAAATAAGGGTGAATCTTCTAGAAAAAGTGATGAAGATCTTAAGATGATAAG
TGTTCAACCTAGCTTTATTAGGGAACTCATTACTACAAGTGAAATTCTGGATTTCTCACC
TACAAGTATGATTATTGATAAAACCAAAGGATCTCTTAGGGTTCACAAGTGTGCAATTGA
GGAATTGCACACCAAGGATGACAATACCTAGATCAATTGCAT
