Contig Data
morexGenes
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Map Locations of contig_176022 (3314 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_176022

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26493 2 1097 bp MLOC_26493.2 Available Available LOC_Os01g67850.1, FRAME:+3, EVALUE:7e-35, 13101.m07379 protein zinc finger, RING-type, putative, expressed





CDS Structure of MLOC_26493






Contig Sequence (3314 bp)

>contig_176022 3314 assembly3_WGSMorex_rbca.fasta
CCAACAATCATTACAGGTTGGTCGACATGAGTCAGGGACCTGACATGTTCGAGAAGATGC
AATCCGATGGCCGCAGGTGTCATGTCTTCTTCGACCTTATTTGTTATGTGAACGGTGAGG
AATTCTCTGTTCTGTGTTCGTTGGATTTCCATTTGCTTAACTTTTTTTATTTAGCTATTC
CGTGCTTGCTGAAATTCTCATATGATGTGACCTGGTATTATATGTGCACAAGTTTTGTTT
ACAACATCCTTTAGACTGGTTTTGTCTGATAGAATTGGGTGAAAGCAGAATTGCTATTTG
TTAGCTATGACCTATGAGTCTGAAATCTAAAGGCATATGCTCTTATAATTTGGTACGGAG
GGTGTTGTTTCGATCGTAAGTAATGGATCATATATGATGGTAGGCAACCCAGGTTGAAAC
CTTAATAAGGGCACTAAGATGTAAGAACATCCTGCAAGTGTTATGAGTATATATTTCAGC
TGCATATAGCATGTTGTTTTGTCTGAAGTAAGCTGTTCTTAATGGGGTGTGAGAAGTGAA
AACACGGATATTCTGTGTCAAAGGAAGAGTTTTGGGTATACCAATGTGCTCAGAACTTGC
TATTCATATGAGAATCTTCTTTCTGCTGTGCTATCTGTTTGCTGCAAATGACATCAAACC
GCATATCTAATATGCGTCATGGTTACAGGTACACAAGATCTTAGTCATGCCCTTCCTGCC
GCGGAAGCTTGAAGAGAGTCCAGTCCAGAGACCTGTGGGTGCTCACGGGCGACGACGATG
TGATCGACCCCGTGACCCTGGAGAAGGAGAACGTGAGGCACTTCCACAGCTTCATCGACA
GTCTGCCCCTCATCGTCCCCGACAACCTTCTGCTGGTCTACCTGCATCTGATAGAAATTT
GCATTTTTAACTTTAACATAGATGTTTAGTAAAATCAGATATAAAAACTGGTGCACAATN
NNNNATGAATCGGTTATGCTTTTTTTTACCCGGTGCAACGCACGGGCATTTGTGCTAGTC
GAAAAATAAAGGAACAAAATAGCAGACTCTCTGCCCTTGTCGTCCTAGACCGACGGGTTC
ATCAGCTCCTCGTCGGCGACGAGCCTGGCGAGCACATCCGGCCGGGCGAGGCACACCTGC
AGCTCCATGCCCCCTCTTCCTCCGCCAACATCATGTCTGCCCTCATAAACCGTGACATAC
CCGTCCATCTTGTTCCCGCCGCCGCTCCGGACGGCCACCGGCCTGCCCCACCCGAAGTCG
TTGCCGTACACGTCGAACCGCGGCGAGCCGGTGACCACCACCGCCTCGGGAGGAAAACGG
CCGGCCAAGGGCTTGAAGCTGGGGTTTCCATGCCACGCCGCGAGCTTCTCCCTCAGGCCC
GCCTCGTCCACCGTAGCCACGGCCCTGTTCAGAAGTGAAGCCGCCCATCCCAGCCGGTCG
TCGCCCAGAATCTCGCCGACTGCGGCCTTGCCGGCGGCGCTCGACACCGCGTTGCCCACG
TAAACCGGCGGCATGCCCTTCAGGCGTGTCCGGCACCCGACGGCGAGCAAGCACGTCGTC
TCCTGGTTCGGCGCGAGCTCCCGTGCCCGACACGTGGCCCGCCACAGGTGCGCGAGCACC
GCCTGCAACGAGGAGATGGTGGTGGTGCCGGCCGCCATCTCAGCGTTCGCTTTCGCCTTG
AGCTTCTTCACGCTCTCCGGGGTGAAATGGATCGAGCATTCATGCACTGCCGGCGGGGAC
TCGGACCGCCTGCCGATGTCCTCCACCTTGGCAAAGGGGAGAGGGACCGGCACGGTGCAG
CCCTCGATGAACCACCTCTTGGCCTTGGGTGGGGGAACCGTGGGGATGTCTCTGTTGCCG
GAGCCGCCGTGGCGGCTGATCTCCGACCATGCGTTGAGCAGATCCCAGAACGTGGTCCCA
TCGGTGGCGGCATGGTTGAGCGACATGGCGATGAAGAGGCCATCGGCGAGCTCGGTGACC
TGCGCGGCCAGGATCGGCAGGCTGGGGTCCACGACGGCGTCGGCGCAGACCATTCCGTTG
AGAGGGAAGAAGGACCAGACCACACGCGGGATGAAAACCGTGCCGGTGATGTCAGCAACG
GTGACCCCGGGTGCCACGGCGTGGACGAACTCGGCGCCTTCGTCACCGCAGCGGAGCGAG
ATCGTCAGGCCCGGTAGCTTCCCGTCGCCGTCTTTGGCCACCGGTGCGACGGCGAAGCGG
CCGGCGAGTGGGTAGAAGCGGCCCAAGGCGCGTGCAAAGGACGACGCAAGGTGTTCGACG
GCGTGCACGCTGGCCGGAGGCTTGGGCAGGAGGACGCCTTTCTGGGCGTAGTCCACGGGG
AGCTGCTGCAGGTCCCATGGCGTCAGGTGGACGGTCTCAGGCTCCGGCGGCCGTGAGCCC
TTTTGATGCTCCGGCTTGACCATGCGCCGGGAGATGATGTCGACAGCGCCGCCTTCCATT
TTGATCGCCGGATGAGCAGTGGCCACTAGCGAGAATGTGAGCTTGAGCTCTACCGTGTGT
GGGTTGGGGTTATACCGTACTGTATATCTGTATTAAAACATGTCTAGCAGATTTATAGTA
AGCGTCTGGTCACCGAGGAGGACTCTCGCGTCCAGCGAAATCGGGATCGTCACCTCATGA
TCCCCGGGAGGGACAAGGCCGCCATGACGGAGTGGCACACATGCCTCCGGGAAGACGTCG
TCGTCGCGAACGAGTTCTGAACGCAGACGAGGACGGAGCGAGTTGCACGTTGTCAGAACA
AGTGTAAGCTCAAGGCACCGACGATTTCCCAGTTAGGTAACCCGAAAATAAACTGGGACT
CGGACGATTCAGGGTGTAAGGACGTGTTTATTACGTCGTGAGATTACACCACAAATCACA
CGACGAAAGAGGAGTAGTAGTCTAGTGTATTTTTGTGAATTTGAATACGTTTTAGTCTCA
TAACAAATACCACAAATACGTGTTTATTACGTCGTGAGATTACACCACAAATACCGTACT
GTATATCTGTATTAAACATGTCTAGCAGATTTATAGTAAGAGGATGATTGGATACGTTTT
AGTCTCATGACTAAAAGTAGTGGGACTAAAACTTGCTAGCCTCATCCATGTTTGGATCCA
AATACTAAAGAGACTAAAATTAAGTTAATGAATATTCATTATCCTTCAAATCCTCCAATC
CAGAACTCGCATGTGTTAGAGGAGTTAAATGAGGAGAGAGAGGACTAATCCACATTTTAG
TAGGGGTATCCCTGATTAATTTTTTTTAGTCTCAAGACTAGTTTTATTCCCTCTTTAGTC
AGGGGTGCTTGGAA