Contig Data
morexGenes
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Map Locations of contig_175850 (2734 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_175850

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26475 8 2430 bp MLOC_26475.1 Available Available LOC_Os03g07110.3, FRAME:+2, EVALUE:8e-59, 13103.m00785 protein calmodulin-binding protein, putative, expressed





CDS Structure of MLOC_26475






Contig Sequence (2734 bp)

>contig_175850 2734 assembly3_WGSMorex_rbca.fasta
AAGAGATTAATCTTGAGGACCACTGCCCAAGATGGAAGCTGCTGCAGCAATGCATCAGGT
ATCTTGGCCCTGTAAGTTGCTGCGACCTGTAGACCAATCCATCAGAAATATGAAATTAGA
AAATGTAGTACTAGCATTCAAGCAAGGAAACAAAAAAAACAGGGCAGTTTCTTTGTGCAG
AGAGAGAGGGAGTTCTATGAGGTAACAATCGAGAATAAGATGATGATGTACAGGCTGTGC
CGCAAGATTGTCAACACGTCCGAGGGGCCCAAGGATGCAAAATGGATCTTTGTGCTGAGC
ACAACGAAAATTCTGTACATAGGCTCGGTCAGAGAATAGTGGCATTTGTCCGTTGTCAGC
AGTACTTTACTGGTACCTGGATCATAAAATTTACCTCTAACTGATGAAATAAGCACATTG
TTGCAGAAAAGCAAAGGGACATTTCAGCACTCCAGCTTCCTTGCCGGTGGAGCCACATCT
GCTGCCGGGAGATTAGTCATCGCGAACGGGATCCTAAAGGTGCCTGGATCTGCAGATTTC
TACTCTTGTCACACTTTCATGTTTGGAGTTCCAAGGTCACCTGTCTGATTCAGTTACCCT
CCTTCGTCTTCAGGCTGTCTGGCCTCATAGCGGGCACTACCGGCCCACGGAGGCCAACTT
CCGGGAGTTCATGAAATATCTCAGGAAGAGGAACGTCGATCTCACGGATGTGAAGGTGAG
CAGACCAAATCTGATCCTTTTTTTAGCTGCTCCACAGATTTCTATATAGCAATGTTTATT
AATGAATATAATATAGCAAGAAACTTGTTGATTACTAATATTGTGAAATTTGTCGGTCAT
CGTCAATTTTGTCTAGTCTATATGTACAGAAGTACATATTTGCAGCAAATTTGTAAGGTT
GTTGTATATTCTCGTATTATTCCATGAAGTATTGCTTGTGTGAGGTACATGTACTGGCCG
CTAACTTGTACGTCCAAGTAAATTGGACTTAGCTCCCACAGCATGTATCTGCGTAGTGGT
GCCATCTTAGATATCCGCTGGCAGAAGCTGAAGAAGACCATCAGATTTAGCGACATTAGG
CAAGAGAAAAGGAGCAGAATGGCAGATGTTGACATCAATAAGAAAGAATTTTGGCATAGG
TTGCAACTAACGTTGGACACAAAGGCACGCACATGTAGTAAGTGGACTTCCAAGGTATAC
TAAATTATTGGAGCAAGCAATCTGTGGAGGGCTTATACACAGATACATGGGGAAAAGAGC
CTCCTCCATAGGTAGGAATCTGATGGACAAATATCACTAAATTAAGTTGTGTGCTGCTCG
AAAAACATTTTTCTATTATCTCTTCTCTCAAAGTTCTAAATAACCCTCCTTGGCTACATG
TTAATTTTTGGTTATCCACTACTCAACCTTCCCCTTATTGTGAGTAAGTTTATCAACCTC
CAAAAGGAAACTCCCCAACCATGCTACTAAATTTTGGCATATGCAATTGATTGAAGTATC
GTCCACTAATATTCTGAAAAAGTAACAATTTTCCAAATTATAAATCTGATGGACAAATTG
TCACCAAATGGAGTCATGTGGGGCTTGAAAAATAATTATGGCCTGCTAACATTTCCAGTC
ATCTATAACAATTTTCCAGTCACCAAATGGAGTCATCTATAACAATTTTCCAAAGCATGC
TAACATTTCCAGTCCTTTTGATAACACATAAACATTTGATACTTCATAAGGAAGAAGCTA
AATGCTCCTTTTTGTTTTGTAGGTTCACATGATGGCCATACTTCCATAGACATGACATGT
TCTGATTTTTTTTATCTTCTCCAATGCTCAGGTTGTTCTAAAAAATTCAACTCATTAATA
TTATCTAATATGATAAAGTTGCTTTTCTCTTTACCGTAAACCGTAGAGTCGTTCAAAAAA
TATTTCTATTTTTTACAAAACTTTAAGAAGAGGGGATATACATAACGATTATATAAATGT
GCTAGGTGATTGTAGAAAATTGTGTTGAATCTTTTATGTTACAGACAAGTACCAATTTGC
TTGAGTAGTTGAAAACAAAAATAGATATTGTTCACTATGTCTTCTTAATTTAGGCATTTT
TTCAATAATATAGATGACTGCTATTGTAACTATGACGTATGGAAAATCTAAATAGGCATT
CGATTTAGGTTTCACTACTACTTCCTGCATGTGTACACCGATCCTTGCTGCCATGTCATT
TTTCTATGTCGCTACTCTACATGGTTTTACTGATATACTTTTCATTGCTCCATTAACCTG
CGAGGCTTCAATTGCATTGATGTAGTACAAGGGAGTGCATGTTGTTGCTTCAGCAGTTGA
TTCATGTCATGGCAAGTGGGCAACATTACTAAATATATGACACTAACCCGCAGATGTTTT
TCTCTAGGATCCTAAGTGCTAAATTTTCACATACATGTATTTAATAATTATAGTATTTAT
ATATCCAAGGTTGCTAGCCCGTGCAGCTGCACGGGTGTACGACTAGTATTTGTAGTTGGG
GGAACTTGTACTAGTTTCCCTCAACTACAAGTATTTCGGTACAGAGGGAGTAGATCACAA
GACTCATTATGCCCCATGTCTACACTACCATCAGAGTCAGCTTGCGCTACTTCCTTATCT
ATATTTTGTAGCAGCAACTTCCTGAGGTGACTTGGTATTCTCACAAATGATTTATTGTAA
ATACGGACATATATCCACCTGACTCTCAAACTAC