Contig Data
morexGenes
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Map Locations of contig_175258 (1521 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_175258

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26386 3 1028 bp MLOC_26386.1 Available Available LOC_Os01g46932.2, FRAME:-1, EVALUE:4e-68, 13101.m04830 protein vacuolar protein-sorting-associated protein 25, putative, expressed





CDS Structure of MLOC_26386






Contig Sequence (1521 bp)

>contig_175258 1521 assembly3_WGSMorex_rbca.fasta
TTTTAGGAGGATAAACTCTGGTTTATTCACTCTTTGTATAACACAGATTATCCCTAGCTT
TATAATAGCTGTCCCTAAAAGGAAAACTATAACTGCGTAATTCCAAGTGATTCTTGTCGA
AACAAATCAACCAATGAATCAGAAAAAAAACACTTATCACTAAGCCCAGGCTTAGCTAGA
CTGAGGCTTGTGGCGGCTATAATAATGCCAGACACACATCACAAGTTGGGTAAACATAAA
AATATTTATCCAACAGCTAAGTCTAAATCCTACATATATATTACCATTTCTACCGTAAAT
TGCTTCCACGATGTTGTTAGAGCATTTGGTATACTTACCAGTCCCATGCGTTTCAATTCC
AGAGCGTATATCCTCAATTGTTGTCACTTCCAACCCATTTTCCTTTACCTACAAGCATAA
CACACAGACACATATTATTCATTGATAAACTGATAGCTCCGAAAGAAACATGTTTAACAG
AATACAAAGTCTTACAAAGTCTACTATGTAGTTAGCCCAATCTTGAATCCGCAGCCAAAG
AATGAGACACTTCTTGTGACTTTTGTCAACCCACTCTGCGCGACCTGCAGTTGAACTTCA
CTTTAAGTAGTTTCACAACACATACCTAAATACAGGTCAGGGGTAATAAAAGCATCCATC
ATGTAGAAAAACAAAAATACACACAGCTAAAACAATAACCAAAAGATTTTATGATGTGCA
GAATGAACCTTCACTAACAAGAGCTGCAAGGAACGCCTCCTTTGCTTCATAGCTTAGAGA
TCCTGAATAATATAAAGCATGTAAGTTCAGTGCAATGCCAATAGAATTGTCCAAATGCGT
AGTAAACTAGTCAAGTAAATAAAATTCATGTACACACTAGTCTGGCATGCTCAAAAGGCT
AAATGGTAGGTGTTAGGAACACATTACCATCATGCCAGATCACTATACATAACATTTTCA
ACACAGTAAGACATAGTTTTGCTGAATTGCAGAAGAGCAGTAGTCAAAACACAAGGTTCA
TATAAATACGACTTACTCTCAATCTTTGGATTGGAGAACAACGGAAAATCTTCTTCCAGG
GAGATTATATACATCTTTTGACTTCTACAGTAATCAAGTATCAGCTCTTTCCATAGCTGC
ACTTGCTTTTCACGTGTTTCTCTCACAGGCTGCAAACTGGGAACAAATGTTGCCATGATA
TTGTATTATCAGTCCGTATACATATCAAAATAAGTGTTCAACAGAAGTTTCCAGAGTTAG
TTTTACACAAATTCCCATACATTACTCAACCAAATGTAAGAATTAGTACAGCAAGGAAAT
GCTTGAATTGGTACACATACTGTTGGGATACGAAAGAAAGATGCCAGATCTCAGCCACTC
TGAATCAAATACTGTGTTACAATTTTGGGAATGTTACAAAGTAGAGATTTGTGAAGAGAG
AGAGACATTTGAGTTTTAAGCAAAGGCACATTTTGTAGAAACAGGTGCTTAAGCAGTGAC
GGACCCAGGGGGGGGGGGGGG