Map Locations of contig_175061 (4716 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_175061

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26352 1 1149 bp AK367025 Available Available None





CDS Structure of MLOC_26352






Contig Sequence (4716 bp)

>contig_175061 4716 assembly3_WGSMorex_rbca.fasta
CAGCCGGCCTCTGCCCCCGCGGCCCGCTGTTTCGTCAGCCCCCGCGGCCCGCTGTTTCGT
CAGCGATCCATGGTTTTCACATCCAAACATGATTTGGAATTATGTGCTAGCCTTTGATTC
CAACAACAAATATCAAGCACATCCAAACAACAGAATTTGAATTGGAGGTCATTTCCTTTC
CATCTTGGATTTGGTATTCCAATTCAATTCAATTCCGGGCCAGTTTTTCCTACATCAGGA
AGACTTATATTTAGAAACAGATGACTTATATTTAGAAAAGGGGGGGGGGGGTATAAAGCA
TGTCAGCAACAACAGATGCACGTAGGATAAGGCTTGGTAGTATTTCGTCTAACAGTCGGT
ACTGTTTGTTTCAAAAGGCTTGGTAGTGTTTATTTCGTCTAACAGTCGGTACTGTTTGTT
TCAAACGAGATTACAGCAACGTAAGTTCACAACCATGCACGACGCCATGACACTTTCAGG
TCACACATGAATGTAGTACTGTCCGGTTAAATACAATGTACTGTAATATGTTGCAGTATG
TAGTTCATGAACTCCATGTGGTCTTAGCAGGTAAAGCTTTCTGAATCGTCTTTGAAAATG
GCTAGAAGGGACAGAAATGAACCCTTACGGATATCGGTGACCTGACAGAAATGAACCCTT
ACAGATATCGGTGACCTAATCACGGCACGATCAAACTGCAGAGGTTTTATTAAAGTAGCA
ACTAGAACGTCCAAGTAGAGAACCATGAAATAGATTCCAAAACTTTCCTGGTCAAAATGC
TCATTACTGAATTACAAATGATCCTTCGCGGTACTAGTTATACTCAACAAGGCTTCCCAA
TATGTCCGGCTAAACTAAAGCACCGATTCCATGAGTGTGGCAACGCTCTATTGATCCTGA
CAAACGGAATGCAATCAAGCAGCCTTGGGCTTGGGCTGAAGTCTCTTCAGTTGTGAGTAC
AGGAAAACTCCCGCAAGAGCTATCGCGGTTCCTACAGACAGACATTTCGAATATGTAAAG
AGGATGTGACATGATCGATAGAACGCACATGAAATACAGGTGCTTACCGATAGAGTTGAT
TGGGGACACGGGGGTCTTGAAGAACAGAACGGATGTAACAATGACCACCACACGCTTGAC
ACAGTTACCTACCGAGTGGGTAACTGGTGACACCCTTGCGAGGATCATGTATGACACCTA
CGGTAAATCAGAAGACGAGTAAGAAAAATTCAAGCAAGTACAGAAGTGCCTAGGCTTCTG
AACACATGTGCTGGGCATATACTAATATACATGACTTGGCATCAGTTTCAAACTATTTGA
AGCCAGGAAAAAAATTATTGATCACAAGTAACAAAGACATCCAAAGAATCTAACAAGGCA
AACCATCACATAACAGAAAACTGAGTAGATGACTGACCTGTTGGTATGCATGGAAACAGA
ATGCCGCAATCAAAGACCTTGTGTACACTTGTTGTAGGTTCAGACCCTGCACAAGAAAGA
ACATAGTGAGAATTGAAACAAGACAGTGTACTTATAAAAAGTTGAACAGACAAATATACA
GTGGATACTCACAGCAGACTGCAGAAAAGTAGGAGTGACCTTGACACCTTCTGTCAACAA
GGTTACAGGGGCTAAGAGGAAGAATGACATGACTGTAATAATCGAGAAGAGATTGATGTT
GTCCAGAGATGCCTGGTCAGAGTTGGTGAAAATATGAAGGTTAGTCATAGATTTTTATAC
AGTCATGGGTAAAGAGTGAGAGGCCCTATGCATGTTCAAATATGAGAGTAACATATCAAT
TACTAACCCTCGGTTCACAAAAAAGAAAACAAAAGAATTGCAGACCGCAGAACACGACTT
AGACAAATTATCTCTACTGTAACACTTAAACAATACCGACTAAAATAATATTATGAAGAT
ACTTTTCAATATTAATATGCGCATATATTTTTCATGTGTCAAATGTAGAAGTTCATAAAG
ATGACCATAGTTGGCCGTACATAATCCAAGAACTGTAAATTGATGAAGTGATTCATAATT
CGGGGGAACTGAACATTGAAATTCAGTTACAACTATCAAGAGAACTGTAAATTGCTGGCT
TGGTTACCTCTTTCTTCAGCATAAGCTTCTTGCTGAGGACATTCCTTGACTGGAAGGTCA
CATTTGAAGCCATTGCACTCAAAAATCCAGCCCTGTTGTCATTTAAATTGTAAATTAATC
ACCAATAATGCACAATAATTTATGAGCAACCATGAATAATGCACAATAATGGGGGAAATA
TGAAGGTTAGATAGATTTGAATTAAATTGTAAATATCAATGCAAAAATGAATACACACAT
GTGCGTGCGAATACATGTCAGCCATTATTTGGTGACCACATATGAAACTCAAGAGACATG
CCACATCTGTAATGTGCACATCAAGCTTCCTAACAATACAGTTATTTCATTCAATGAAGG
TGCTAATATTGCTTACCAGTTAAAAGAAGCTTCAGAAATAGATGCCAATGCCACACCACC
AACAATAGGAAGAAGAGACAAAACAACCCAAGGAGTAGGCAGCTGCATGGCCATTCATGT
GTCAGAACAGGACCAAGAAATTTCTTTAGATTATGCACATTTGCAACGTTGCATGGAAGA
TCTAACAGAGGACAGAGAAACATTACCTCGCCAAGGAACATTGCAGAAAGTAGAACTGAG
AAGAAAGGCTCCATGGCCTTGATTGTATGTGTGAATGACACTGCAACCTTCCCAAGGCTC
ATGTTGGTGAAAAGATTGCCCATGGTATGGACAATAGCCAGAGGGAGGATAGCAAGAAGC
TGGAAAATAAGAACCATTAGAATACATATTCTAATGGTGCAATACATGTGTACTGAAAGT
TTGTCACGGGAGACTAGATAATTACCTGTGCACCGGAAATCTTTGGTCTTTTAAGGATAC
CCGTGGCCCACATAAACAAGGAAATCGTAGTTCCAACAGCAAACTGAACAGTTGTGATGT
TAATGGGATAAGGAAAAACCTTGAGGACCTGTCAAATAAATGAAGAGCAGAGAAAGTTGC
ATTATCCACAGGTAAATGATGCAATTGTATAGAAAATTCTTAGGAAAATCATTCCTAAGG
CGAGAACGTCTGCATCAACTCTCTCTGTAGCTTAATCATTAACAAAACATTTGCCACAGA
ATTCTCTGTTTTCACGCTCACCAGAAAACAGAAGGGCATGGTAACCATTCAAATCTGTAA
TCACAGAGGCAAATATTGGACAAAGAAATGAACATATATGTCCGTAGGATTAAAGCCATA
GTGCACATCACATCGGTACAGTGCATTATGAAAAAACCTGAGTGAAGTTGACAGCAAATG
CTTATTCTCACATGCAGCAGACAGGAAGAACTCTTACTTGATTGGAATTATTACTACAAT
AAGCCTAGGCTCTGACATGTCGCCCTACAAATTTTATACACTTAAGCTAATAGCTCAGGA
AAGTGCTACAGGTTCAATATCTTCAATTGTCTAAACTAAGTTTTTGGAATAAATAAAAAC
AAATAATGTTGACAAGAAGTTACAAAGTATGAGGCAAAATGGGAAAGTATTTCAACAACC
CAGCTAAAAATCGTGAACTTAGACATTTCTGAATCTAAAGACATTCTTCAAAAAGCTACA
GCGAAGATCACTTTGCCATACGGATGAACCATATAGGTTAGCTTTCTCCAGACAGGAAGC
ACCCAGATTTGATATGAATTATCTACTTCTACTGATCCTGGGTTATGAACTATAAAGGTC
AGCTTTCTCTTCACACAAACAGACAGGAAGGACCCTGATATGATAGGAATTATTTGCTTC
TACCGATCCTGGGTTCTGGTGTGCGGCCTTACAAATTTATGCACTTGCAGTAAATGTTGA
TCAGAAAAGGCAATTCAAGTTTAATACGTTATTCGGTGGTCTGTTGTAGGTTTATGTAAT
CAATGATGTTCACGAAAACAAATCACAAAATATGAAGCAAAATGGTATTTTCGACATGCT
TAGTTCAGTTAGATTTCACTGAATCTTCACGAAAACAAATCACAAAATATGAAGCAAAAT
GGTATTTTCGACATGCTTAGTTCAGTTAGATTTCACTGAATCTTCACGAAAACAAATCAC
AAAATATGAAGCAAAATGGTATTTTCAACATGCTTAGTTCAGTTAGATTTCACTGAATCT
AAGGATGATTCATCAAAAGACCACTCGGTCAGACGAGTACAAGGAACTGCATGAGCAGCC
ACCGGAAAAAACAGTAACGGAAATAAAGATCTGGCAGAGGAATTTACATGCAATGCCACT
CGCGATGATCCGAATTGGAGAGATGCGGAGTAGTTGCAGAGATCTGTCTGTACGAGACTA
CGAACGCGCCAAAACAACCGAAAAAACACGTGGATTTGCACCCAAAGTAGCCGATTTCCA
GGCCAATTGATGAGATCGAACTAAGGCGCGCTCGGTAAACTACGGAGGACTAGAAGATAT
AGCCTTGCACTCGACAGGAAAGCAACCTGTTGGTGCAAACAAAAGGCGTGGCAGCTCACC
TGTTTGTTGTAGATGTTGAAGTAGATGTTGAAGAGGTACCAGAGCCCGAAGAAGACGCCG
AGCTGGAGCGTCTTGGCGAGCGCCGCTCCGCTTTCCTCCCCGGCCTCCTCGCCCGGCGCC
GCCTTCCCGGCGGCCGCGGCGGCCACGAGGCCGCCG