morexGenes - Barley RNA-seq Database

Contig contig_1750249

Source Contig contig_1750249

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1750249 (521 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_1750249

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_26350	2	457 bp	MLOC_26350.1	Available	Available	LOC_Os03g08440.2, FRAME:+2, EVALUE:2e-18, 13103.m00971 protein ribosomal protein S2, putative, expressed

CDS Structure of MLOC_26350

Contig Sequence (521 bp)

>contig_1750249 521 assembly3_WGSMorex_rbca.fasta
CTTCCCGGCGCCACCCAGACGCTCGAGTCCCCGACCAACCATGGCGGCAGCGGCCGGAGA
AGCCCCGCGGGCGCTGTCCCAGAAGGAGCAGGACGTACAGATGATGCTCGCCGCCGACGT
CCACCTCGGCACCAAGAACTGCGACTTCCAGATGGAGCGCTACGCCTACAAGCGCCGCTC
CGACGGTACGTGCACGCTCGGAACCCCCTTGACCCCACCACGCGCCTCCGTTGGCTAGGT
TCAGTCGTCGCCTCCATGGATCTAGCCTTGCCCTCTGCACTAGTTAGGGTCGATCTGCTC
CGGATCGTGATGCTTATCGGTGTAGCTGTCGTCGCAAAGTGATGATGCTTCTTTCCTTCT
TTGAGATGAGCTGTGGGATGTGACGCGTCTGTTCCTTGTTTGTGGTTCCTAGGCATCTAC
ATCATCAACCTGGGCAAGACATGGGAGAAGCTCCAGCTCNNNNNNAGGGTCATCGTCGCC
ATCGAGAACCCGCAGGACATCATCGTCCAGTCCGCCCGCCC