| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_174828
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_26305 |
1 |
177 bp |
MLOC_26305.1 |
Available |
Available |
LOC_Os06g01390.1, FRAME:+3, EVALUE:5e-12, 13106.m00041 protein acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed |
| MLOC_26303 |
1 |
173 bp |
MLOC_26303.1 |
Not available |
Available |
LOC_Os06g01390.1, FRAME:+2, EVALUE:7e-13, 13106.m00041 protein acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed |
| MLOC_26304 |
1 |
445 bp |
AK365781 |
Not available |
Available |
None |
| MLOC_26302 |
1 |
163 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_26305
CDS Structure of MLOC_26303
CDS Structure of MLOC_26304
CDS Structure of MLOC_26302
Contig Sequence (1876 bp)
>contig_174828 1876 assembly3_WGSMorex_rbca.fasta
TGCGCTGCCGCCGCCGCCCCGTCACGCGCCCGCTGCTTCTCGCCTCGCCCCCTCCCACTC
CCTCCCCTCCCCAACCTCGTGCTTCTCACCTCGCCCCCTCCCACTCCAACCACCCCACCC
CGCCCACGCGCCGGCAGCAGCTACTGCTAACTAAGATGGCGAACGTTGGAGGGGAACCCG
TCCACCTAGCCGGGGAGAGGGAGGGAGGGGGAGGAAAGGGAAGGAGACTAACCCAAGGGC
CGCGCGGGGAGGTATCCACGATCTGTTCTGCTCCATCTCATCCATAACTCACCTTCTCGC
CGCAAACCGCAGATGCTTCGCCACCGTGAATCGGATCCGGCCGGCCGCGAGGGCCTTCTC
CGGTGCTCCGGCTTGGGCGGCCGACCCGCAGGTACTCTCTCTCTCTCTCTCTCTCCCTCT
CTCTACGAGAATCGCTAGTGTCGTGGCCCTGTAGGGTTCAGGGAGACGACCCGCTCAGGG
TGCCCGAGGATAGCTAGATTGGTTCAGGTTTCGTTCCTAATGCGCGATTGATTGTGTCCC
TGAACATGTAGGGTGGCCTAGAGAAGGTTGGCGGCGTGAGAGCTGGGGATGACGAGCTCG
ACGTTGCTATCGTCGGTGGAGGCATGGTGGGCCTGGCTATTGCTTGTGCATTGTGTAGGT
ATTGCTACTTTCGTGTACTTCTGTTCATTTCTCCCAATTGTTCATGAGCTCAGCTTCATG
TTGCTCTTTGGCTGAGAATCGATCCGTATAATCGGTAGGCTACATCGTTAGTTATAATAA
GAGTAGTACAGTTCTCAGGGGTTCTCGCTGCCATTTTACTAGTTCAATCTCAAGTATTGC
TAATCCTGTTGGTAGTACAGGGGAGTTTGTTGGTTGTACCAAATGCCTCGTGTATGAGTT
TTCATAAGCTTGTCCTGAGAGTGCTTGAATTATCTTTGATCTCTTGATGACTGCAACTAG
GAACATAAATTAACTTATTTTCTCAAATTGGCCACAACACTTAATGCGATGCTTCTTTTG
CATGGCATCTTTGTTCCTGCCATAAAAGGGCAAGGGACTAAAGAGCAACAGAAGAAGTGG
TTGCCAATGGCGTACAAGTTCCAAATAATTGGATGATATGCTCAGACTGAACTTGCCCAT
GGTTCAAATGTTCAGGGTCTTGAGACAACTGCCACATTTGAGCCAAGTACTGATGAGTTT
GTTATGCATAGCCCAACTCTGACCTCTAGCAAGGTAACATTTTGTAAACCTGCTTATATA
GTTTTCTTATTTATTTTAGGATTTTGCTTTCTTAGTTATATTTTCTCATCAATCCTAAAT
TTCTCAAGGGCCTCCTTTTGCATGGTTAATGATTTCCCCTCTCCAATGTGCAGTGGTGGC
CTGGCGTTTTGGGCGAAGCTTCCACTCATGCAGTTGTCTATGCTCGTCTCATTACAGAAG
GAAAAGACTATGGCATACATGGTAAAGCATTCTGCATTTTATGGTTGACACTTAAGTGGG
CTTTCCCTTTGCGAACTCTAACTCATGCACATCCATATTTCAGGTTTCATTGTGTAGTTG
CAAAGATTAGATGACCACTCTCCTCTTCCTGGCGTTACTCTCCGTGATATTGGTGGAAAG
TTTGGCAGTGGGGCGTATAACAGCATGGATAATGGTGTTCTGCGCTTCGACCATGTGCAC
ATCCCAAGGGATCAAATGTTGATGAGGTTGGTCCGTTGGCATGTTTTTTGTTCTGCCACT
TTATGTGTGTACCAATATATCTTGTTAGTTTGTTGTAATCGTCCTAAAATATGCCATGTT
TTCCAGAGTCTAGCCAGTTTATATAATATGTAGAATTTGTATGCTTAGATATAAGGAATC
TAACGGTTATTGGCTG
