Contig Data
morexGenes
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Map Locations of contig_173894 (2131 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_173894

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26154 1 241 bp MLOC_26154.1 Available Available None
MLOC_26153 1 715 bp None Available Available LOC_Os08g17990.1, FRAME:+3, EVALUE:2e-94, 13108.m01918 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_26154






CDS Structure of MLOC_26153






Contig Sequence (2131 bp)

>contig_173894 2131 assembly3_WGSMorex_rbca.fasta
TTATTTTTTGGGTATCGAGGTGCTTCACAATTCAGGGGGAATGATTCTGTCCCAACAGAA
ATATGCACTTGATCTCCCACAACGCACCAACATGGGCAATTGCAAAGCAGTATCGACACC
CATGTGTACCCATGAGAAGCTCATAAGAGAGTCTGGAGATTGCTTGAATGAGGAAGAGTC
TTTTCAGTACAGGAGCACCGTTGGGGCACTTCAATATTTAACCTTGACACGACCTGATTT
ATCATTTGCCGTCAACAAGGTCTGCCAGTACCTATCACGACCTACTGATGTGCATTAGGA
AGCTGTGAAGAGAATACTGCATTTTGTAAAAGGCACCGTGTCTACAGGATTGACACTTCG
ACGATCTCCATCAACCTTAATAAGCATCTACACTAATGCGGATTGGGCCGGTTGCATTGA
TGATCGTAGGTCCACAGGTGGCTTCGCAGTTTTCTTCAGGCCTAACCTCATCTCATGGAG
TGCACGGAAGCAGCCAACAGTGTCACGATCGTCAACTGAAGCAGAGTATAAAGCCCTGGC
AAATGGAACAGCAAAAGCAACATGGTTGCAGTCCTTGTTGAGAGAACTCAGAGTATGTCA
GCCTCGAGCCCCTGTTCTTTGGTGTGACAATCTTGGCGCAACTTACCTCACGGCCAATCC
AGTGTTTCATGCTCGCACTAAACACATCAAGGTAGATTTCCATTTCGTAAGAGAGAAGGT
GGCCATGAAAGCATTGGAAGTGCGGTTCATCTCCTCAGCTGACCAGGTTGTTGATGCATT
CACAAAGCCTTTGACAAAGTTGATGCTTGCACGCCTTCGTTCCAATCTCCACCTTCATAC
AGGTTGACATTGAGGGGGAATATTAACGTACAAGATCCTAACGTATGTTAGTTAGGCTTA
GGTCATGTATATCTTGTTTATCATGAAATTCTAGAAATATTCACAAATTTAAATGTTTAG
TATTTTTTAGTAATCACATAATATTAAAATTTTGAAATTAAAAGTGTTTGCAAATCGAAA
ACAATGTTCAAGACTGGATGAAAAATAATATGATTATGGATCTAAAAAATAATTATGAAT
TTTAAAACGTTCATTGGCTTTTGGGAATATATTCAGCAATTTTAAAAAGACAAAGGAAAC
ACACAGCGCTTAATAGTTGAGGAAACAAAGCATGCCAGGCTTAAGCGGGCCAGCCCATGT
TCAATTTTCGTGAGCCTCCGGAAAAAAACGTGTCTTTCGTTGGTTAATAACTTTGAGGAA
ATATACTAATATACAGATTGTTTCAAAAAAGGTTTATTATACACTTCCTCCTTTTTTAAA
TAATTATACTCCCTTCGTACCAGTGCATAGGGCACCTTACAAAAATCAGATTTTTTTAAA
ACACTAGTCATTTTTCATTAACTGCTCTCCTCGTTCCCCTCCCAGCCTCGATCTCTTCCC
GAGGAAACCCCTCCCCTCCTCTTCCTTCGGCTACATGCGTGAATCCAGGCTGGCGTGCAT
GCATGTGTGAAGCCAGGATGCTTGGCGTGCATGCCCTCTCCTCTCCCACCTTTCCCTTCC
TTTAAATACTCCTACACAGATCGGTTCTATGGGCGCCATGGAAAAGGAGGAAAACAGCGA
CATAGGAGAGGATGCACTGAAGCAGTAGTACGACGACATGGGGGGCGAACTAGGGCAGCA
GCAGATTGGCGCCGCGGTGGAGGTGCTCGTGTGTAGCCTAAGATCGATGCCGCGGTGGAT
GTGCTCATGCAGCAGCAACATGAAGAAGACACGGAGCAGCAGCAGCATGGCACCATGGGG
GAGGAGATAGGCACCGTGGGAGAGAAGGTATAGTTAATTGACCCCTTATGCATAGTGAAT
TGACCCCTTATGCTTAATGATCTCTCTCATACAAGCCTGATGACTGAGGAAAATCCTATT
TAAACGTTGATGTGGATATTCTTCTAGCGATTCTTCCACCTTCTTGACAATATCAGGGAG
ATCCTTTGGCATTTTTCTTTGAAAGATGGCTTGAATAGAGTTAAACCTGTTAGGTTGATC
ACTTTTGCGTGGGCCCAACGGCCCACCGGGCCCTTGATCTATGCGCCCTGATCGGGGGTG
CTCAACCCATTATGGTTGGTGGGCCCCTGTG