Contig Data
morexGenes
Links



Map Locations of contig_173029 (4782 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_173029

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_26029 3 928 bp MLOC_26029.3 Available Available LOC_Os05g45040.1, FRAME:-3, EVALUE:1e-43, 13105.m04778 protein OsFBX170 - F-box domain containing protein, expressed
MLOC_26028 2 1201 bp AK250931.1 Available Available None





CDS Structure of MLOC_26029






CDS Structure of MLOC_26028






Contig Sequence (4782 bp)

>contig_173029 4782 assembly3_WGSMorex_rbca.fasta
GCGCGCAGTCGCGCCCGCCCGCCGCCCCGCCTGGCCCGCTATGCTGGAGGGGGCCACAGC
CGGCGGGGCCCCCCGGCGGGCCCCGCCCCCCCTCCAGCCCCCCGCTGTTGTCACGCGCCT
CGTGCACCCGGCCCCTCGCCCCACGCCCACTGCCTAGCGGGTCCCACGCCCCGGGGTTCG
GTGCTAGGGCCACGCGAGGCGGAGCAGGCGCACAAAACACGCGGCCCCGAGGCACGGGAA
AGGAAAGGGATTGATTGATCCAGCGGGCGACGGCAGGCAGAGTCGCAGAGAAGGCAAGCG
TCCGTCGGGCTCGAGCGAGCGAGCGAGCGAGAGAGAGAGGGCAGCATGAGCGAGCAGGGG
GCGGGGCAGGGCAGCAAGGAGGAGTCGCTGATGGACAAGATCACGGAGAAGTTCCACGGG
TCCTCCTCCTCCTCCTCGTCGTCGGACGACGAGGCGGGGAGGGCCGCCGGGTCGTCGTCG
TCGTCCGTCAAGGCCAAGATCTACCGCCTCTTCGGCCGCGAGAAGCCCGTCCACTCCGTC
CTCGGCGGCGGCAAGCGTGAGTCCGCTTACCCCTCGCGTGCTTCGTTCAGCCCAGCGTGG
TTTCGCAGATCCGGCCGCACCGGGGCTTCCGCTTCCGAGCGCTCGACAGCTCGTCTAGGG
AGACCGCAACCTGCCCGCGCTTGCTCCGGTTTCTCTAGTGATCTCTCTAGACGAGCTGTC
CAGCGCTCAACGACTAGGGAGAGGGAGTAGAAAGCTCGGTGTTCGTCGGACACGGGCCCC
GCTAATTAGTCCCTAGATGGAGAAAGCGTCCGATCTGCGATTTTCCGGGTCAAGTCACCG
CCCCGCGGCATTGTCGGCGGTGCGTGATTAGATTACAACTGTCTGTACCTGATGATGAAG
CCTCTGCTCCTAGGCTCTGGCTCGGTTCAAGTGATTCAGGGATTCTGTTGCTACTGTTAT
TTTGCAAGAGGAAGCAGGCTAGCAGCCGAGCCCGTGGCGCCGCGTCCTTCTAAGCTGGCT
TGAACCCTGCGATGCTTTCTTCCTTTGCTAGATCGATAGGCCTCGTTGGTTCGGGCCTCT
TCTTGATGTGCTGTGCTTATGGTGTTGTTGTGCTTGTTGCAGCCGCCGACCTCTTGCTGT
GGAGGAACAAGAAGATCTCCGGCGGGGTGCTCGCGGGCGCCACCACCATCTGGCTGCTGT
TTGAGGTCCTGGAGTACCATCTCCTCACCCTCCTCTGCCACGGCTTCATCCTCACCCTGG
GCATCCTCTTCCTCTGGTCCAACGCCTCTGCCTTCGTCAACAAGTGAGCTTCTTCGAGTT
TACCTTGTTATTTGCACCCACATCAGTTGTGAGATGACAATGCCTTGTGAGCTTGTTATT
TGCACCCACATCAGTTGTAGGATTTGCAATGCCTCGTGAACTTATTGTTTGCACCCACAT
CAGTTGTAGGATGGCAATGCCTCGTGAGCTTATTATTTGCGCCCACATCAGTTGTAGGAT
GGCAATGCCTCGTGAGCTTCTTATTTGCACCCACATCAGTTGTAGGATGGCAATGCCTCG
TGAGCTTGTTATTTGCACCCACATCAGTTGTAAGATGGCAATGCCTCGTGAGCTTGTTAT
TTGCACCCACATCAGTTGTAGGATGTCAATGCCTCGTGAGCTTCTTATTTGCACCCACAT
CAGTTGTAGGATGGCAATGCTTCATGAGCTTCTCTTTTGCACCCACATCAGTTGTGGGAT
AACAATGCCTCGTGAATACAACCTGCATTTCTGTTTCGTGTATGGAACTATGGATGAATG
CTGTGTAAACAAGTTTGTGATTACAATGATGATAACAGTTGTGGCAATGGATCCAAGTTT
GTGATTGTAAATATATATTTTCAGGTGCCCTCCCAACATTCCAGAGGTGAAGATCCCTGA
GGACCTGGCGGTCAATGTTGCCCGCTCGCTGCGCTATGAGATCAACAGGGGCTTTGCTAG
CCTGAGGGCCATTGGCCAAGGCCGCGACCTGAAGAAATTCCTGATTGTATGTTGATCGGT
TGCATGATTTAGTTCTCTTTAACCTTCACTTGTTCATTCCTGGTTTGTTTGATTGGTGAC
TTATTATGTTGTCTCTTTGTTCCAGGTGGTTGCAGGCCTGTGGATCCTCTCTGCTCTTGG
CAGCTCCTGCAATTTCCTCACCTTGTTCTACATAGGTAAATGTAGCTTGTTGCTTCAGTA
TGTAACTTGCATATGTGCAATAGGCTTACCTAGCTTTGTTTCACTGATTATGCCTTCATG
TTTGCAGTCTTCATGGTACTCTACACCGTGCCTGTCCTGTACGAGAAGTATGAGGACAAG
ATTGATGCTTTTGGAGAGAAGGCCATGGTCGAACTGAAGAAGTACTACGCCATCTTCGAT
GAGAAGTGCCTGTCCAAGATTCCCAAGGGTCCGTCCAAGGACAAGAAGCAGCATTAGAAC
AGTAGAGAGTACCCTGCGCAGATTTATCTTCAAAGTTGATCACTACTCGTCGGTTTTCAA
GGATGGTTGTGAACTTGTGATTCCATGTCCGTAGGTGATAGTAGATACCACTATCTGGTC
AAAATCCTGGCACGGTCATTAGTGTGACGTGCAACTTCTACGAACTTAGTAGTCATGCCA
GCTTTTGCTCAGTATCCTCACTTGCAAGTTGTGTTGGTGTAATATGGCAGTGATGTTTGT
GACTTCAGGAGACTTGGTACAATGAAGTGGCTCTTTGGGTGTGTCATCATTCCTGGGGTT
TATGTCGTTTGTTGGTCTTGATATGCATATGCATCCGTTGGGCTTCAGTTGATTTGGATG
AATGTTTTGTCTATCATGTTTGTGTGCTGAAGCGTCTAGTTTTGTGATCACTAGTCATTC
TACAATGAAGTGACACTTTGGATGTTATGTCATCCCTGGGGTTTATATCGTCATTCTTGT
GGTTTATATCTACAATGAAATGGCACTTTGGATGTTATGTCATTCCTGGGGTTTATATCG
TCATTCTTGGGGTTTATATCTACAATGAATTGGCACTTTGGATGCTATGTCATTCCTGGG
GTTTATATCGTCATTCTTGGGGTTTATATCTACAATGAAGTGGCTCTTCGGATGTTATGT
CATTCCTGGGGTTTATATCTACAATGAAGTGGCTCTTTGGATGTTATGTCATTCCTGGGG
TTTATATCGTTTTATTCTTAGGGTTTATAACTATTTATGTTGGGCTTCAGCTGATTCGGA
TTAATGTTTTGTCTATCATGTTTGTGTGCTGAAGCGTTTGGTTTTGTCAGATCACTTGTG
TACATATAAACCGCCTTGAGAGGTTTTGTTGAGCCTGTGATGGAGAAGCACATCACTATG
TACTCCCTCCGCGCCATAATATAAGAGCGTTTTTGACACTAGTATAGTGCAAAAAATGCT
CTTATATTATGGGACAGAGGTAGTATATGTATATGTCTCAGAAATTACCAGAAATCAAAA
TGGTATAACAACGAATTGCTAAAACATGAGAAATATAAAACCATCTTTGCATATGATCAC
TTGTCCTTATCAAGAGTTGCTATCGCTGCTAGTGTTCTGTTTACAGCAGTGGGTGTAGGA
GCAGAGTGTTTGAAGTTATAAGTTCTCATTGAACATTTCATGGTGAATTACAACAGCGTG
AATGCCGGTGTCAGAAATCACCAGAATATAAACGGTACAACAAAACTAGCTTACACATAT
ATACAAGCGAATTCACTCAAACACGAGAATTCCAAAGTCGTCTGGGCACGTTGTTTTCAG
AATCACTATCTGTATCTTCACTGTCAGATGATGAAGACGGTCGATCATGAGCATTTAATA
TGTAACAAGCAACCTGGCATATAAACGAGTGAAATCAGTCCGACAAATGTACAATGGAAT
ATCAAGTCAAGTGAAAGTGCAGAGCTAAAGGTACAAAAATAACAAATACTCATGGACTAC
ATCCAAAAGGCTGATCAATCTGTAAAATGGATATTACGATTAAAAAATAAATTTATCGCA
TGCAAAAACCCCATCATACAAAGTATTGACTATAAGATAGAAGCACTTACTGCATAAGGT
AACATGGGCATTAGTTTTACTTCATCTCTTCCTTTCTTAGGACAATGGTGAGGAGCAGCA
CACGTCAAATTGCTCAGCCAAAGAATCGAACGGCATTGCTGACATATTGCTCTATTTGAT
GAGGCACTCCAGCTTATGCACTCTGTATTAATGATAATTCCGTCATGTTTAGAAGGGAAT
ACTGGAAGTTGCCCAGTGTAATTTACATCGAGAATACTAGCATACGAGAGCATTACCTGC
ATGCTTGTTGCGGAAAACCTCTTTCCAGTTCAAATTGGGATCATCAAATACTGGATCCAC
ATTATTCTGCACAAGAAGAGCATGACTGTTTTGTATACCACTGGATACAGGCGTGCTGTT
GGAGCTCAAATGGGACGCGCTAAAGAAGAGGGAGTAGTTTGTTTTCCACAGCTTGCTGTC
GTTTGCAGATGAATTCCAAGGCCTTCTAGGGAATATGCAAGTGTCAACAACAAGAGCTAG
CATATGTTTGGAAATAGTATATGGTATGAGAGAAGAAAAAAATACCAGCACACAAGACTA
GCTGCCACCAAAGAACGCATGTCCAGAAAACTGAAGATATGAATAAGCACATCATTTGGT
ATGTGTGGGGGACCTGTCAAAGAGGTTCAAGACAAATATCACAATGATAGTGTATTGATA
TATGAGGATACATACTCATAAACTCCCCCCCCCCCCCCCCCC