Contig Data
morexGenes
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Map Locations of contig_171817 (3312 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_171817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_25865 1 1042 bp None Available Available None
MLOC_25866 1 688 bp None Available Available None





CDS Structure of MLOC_25865






CDS Structure of MLOC_25866






Contig Sequence (3312 bp)

>contig_171817 3312 assembly3_WGSMorex_rbca.fasta
TGTAGAACGCCTTTATAGTCACACAGTTACGTTGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCCGGGAGTTGCATGATCTCATTGTCACACCCCAAAATTTTAATAATGTTTT
TCTGAAATAAAATATTGTGTAGAATAAAACTTTTGGGAAATAAATTGCTTCATGATTCCT
TTCAAAACCTCTTTCCAAAAACTTTTCCTTTCAAGTGGCATTTCAAAGATCGTTTAGTGC
TTGAGCCCTTGCTTGAGACCCTTTTGAATTCTTTATTTAATTAGATGGGAATATTATTTT
GGCCATGTTTATTTAAAAATCTGAATTTCTGGACTTTTAATTAATCTTTGAAACACTCCT
TTTCCTTTATAAGGATGTTTTCCCTAGGTAAATGTTTTTGATAATTTATGTTGGAACCTG
AGTACTTGCATAAAAACATTTCTTTTCTTCTAGCAATTTCATGGGATATTTATTTTAATA
TTTTACCTAGACTTCTTTTATACACAATGACTTATATTTTCTTCAAGGTCCTGTTTTGCA
CTACAACCTTGTGATCACTTATTCTAAAAATTCTATAAAAATTTGAAGGTGACCTGTCAT
GTCCGTGGATCACATTTATGCAAAAACTTACCCAAGTGTTTTGAAAAATTTGAGATCATT
AACTTCTTTTCTAATCTGGTCCAGATTGGAGTTTGTACTACAACCCCTAGGAATAATTTC
TCAATATTTCTATAAAAAAATGGGGATGTCAAGTGATGCATGAAATCCACTTCTATACAA
AAACCGCACTATGTGCTTTGTAAAATTTTAGCATAACAACCATTTTTCTGTTCTGGTCTA
GTTGGTGCTTTGCAGTACAACCATATTTTTCCTTGCTCTAATTGCTTTGATATTTTGCAT
GCTTGTTTGGCACCCTACCAAAACCTTAACCCGAGGAGTTGAGCTCCATTGGATGGTTTT
AAGTGCATGTGATTCAAGATTCTATCCAGAAATATGTTCTTCAAAATACTGCATTAGCTA
GTTTTGCTTTTTTGCCAAACTAACCCTACCACCATTGCTAGCACCTAGAGAGACCCCGAG
CTGGAGTTTTTTGGGACTAGCAAATACGAGTGGATGCATGTAGCTTTCTGTCGAGCAGGT
TATGTGCATGACCAGATTTGGCACATGATACAGTTTGCATTTGCAACTTTCTCCCCTAGC
CCAATATTCATGTCCATCCACTCTGCCTTAGTGTCTAGCGTACCCCTGTGTGTTTGCATG
AGCATTGGAGCCCTTTTTCCTGCACTGGCATGGTGTGGAACACATTGTGTGCATGCTGTG
GAACACATTGTGTGCATGCTGTGGGTGCACTAGAGCGCACGTTTTGCACGTGGGTGCCGA
GCCGTCGCGTCCCTGCTCCCCCTTGCTCTCTCACTAGTCGGAGCGCCGCGTCAACCCCCT
CCCCCAATAGTTGGTCGCCGCCATGTGCGGGAGCAGTGCAGCGGCAGCGTAACGGCCGCG
GCTTCCTCTGCTTCACTGCAGTGGCCGGCGTCACCCGAGCTCCTTCCGTGCTCCACCTGT
CCGTGGACCCTCCCCCTACGTCGTATGCTGCTCCCCCGCTGCCCTGCTGCCCTCCTGAGC
CCCTGTCGCCGCCCTGCTTCGCCATGCTGCTTCGCTGCTTCTGGCAGGAACTGCCGCCGT
TGATTTCATCCACAAGTGTCGGTGAGCCAACGCGAGCCGGCTATATAAGGACCCCTGAGC
CTCACAACTTCACAAGCAGCCTCCCCTGATCCTCAGCTTGCTCCCCCTCGCCTCTGTTCG
ACCGGAGCTGCTCGTCTCTAACAGTAGCACCACTGCCGCCCTCTGATGAAATACACCATA
GCTGAAGCCCCTAGCTGCGCCCCACCGCACCAGCCACACCCCCTGAGCCCCCTCGAAGCC
TCGCCACCGCTCTTACTCGAGGAAGAACCGCTGAAGGCCGAAGCAACCAAACCAGAAAGG
CCATCCGCCATTATTGAAGCCCCGCCCAGCCTCGAGCTCCGTTGCTCTCCTAACCACCGA
AAAAGGATGCGATACCCTCCCGCGAGCGTGTGCATAGTCGGAACGCGATGGGAGGCGCTT
TGTGCCGCCGGGGAGCCTCGCTGGAAGAACGCCTCTGCTCTGCCCCGGCTCGCGCGGGAG
GTAGCAGGAGGATCCGACAGGCGGGCCCCGCTTGTCGGTGAGTGAGCCAAGCCCCGAGTG
GCGCAACCCCCCTCATACATCTTATTTTAAGTAAAGCGCATTACCTTGTAACTGTCACTG
CAAATGCACTTCCTCGGTTAGGAAGCGTATATACCCCCGAAACGTTTTCTTTTATATTGA
TTCTAAAAACAGATTAGGACAGAAACTTCGAATAGCTCTAACTTTTTATAGGAAACTCCA
AATCAATTGATTCTTTTTCCTACCTGTTTAGAATTTCATCTAGTTTATGTTAAGATTTAT
TTCAAAATTATTCAAACAACTTTTGTCTGCTGTTTTATGTTTGCGTGTTGATCCAAATAT
TTTTCAAACTAAGATTTTAAAGAGAGGATACCTACTCCAAGATGTTGGGGTACACATCCC
CTCCTCAAATCCTAAGGCACGAATCTTGTATCCAAATTTGCATAAAGATGTGTGATGATT
GTGGTGGTGCATATATTGCGTGATTTGAGGTTATGTTGATAATAATCTCGCATGAAATAA
TACTTTGCATATTTCATGCATGCTACTCATATTATAACAATGGTGAAACATGATGATGGC
ATGTGCTAGTTATGAAAGGTCGTGGAATAACCTAGTCACGCGGAATGTGATAGGTTATGG
ACTGGTCATGACATGTGCACGATGATGCTAGTAAAACTTGGTTAACTCCAGTATCGACCT
AGATCGAGTCTTGTCCGTGTCGTACTTCTATAACGTGCTACCACAGTTTTTTGGATAATG
GATTCGGTAAAGTCAGTTGTAGACCTATTATCAGTCACACACCAATTAGAGGGGCCGGGA
TGAAGGTATCCAGGGCAGTGGACTAAATCCAGTCATCCGGTTAGGGGGCATGGGTGTTCT
CGGTTTGGGACCGGGAGGGAATGGCCCTTCCCAGGGAGCACACGGTATAATTTTTTGATC
CCATGCTTGTCGAGGTCGGAGCGTCCCCATCTTATGGTTTTACCTTGGCAGCATAGTCCG
AGTGAAACCGAGCTTAGTGGAGGAAAAATCGATGTGTGCTGATTCTGAGTGTGTGCTTCT
AAAATGCCGTACGCGGGATTAGTCTTGTCGACTATCGGAAACCGTGAGATATGGGTAAAG
AGTACACCCTCT