| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_171050
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_25744 |
1 |
112 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_25744
Contig Sequence (5471 bp)
>contig_171050 5471 assembly3_WGSMorex_rbca.fasta
TTTCTTTTATGCTGTTAATGGATCTATAAATAACAGCCCATACAACTTTGAAGCCCATAA
ACATAAATCTGAAGCATCTCTAAATGACAGCCCACACCACAAAGTTTGACGCACATTTCA
AGATCTGATAATATAGCCAAAACCTGTAGCACAACCAAAATCTGCTACCAAACCTGTAGC
ACAATCTCGTACAAAATTACACAACCAAGTGCACAAAATCTGCTACCAAACCAAGTGGTA
TCACAAAATCTGCTACCAAACCAAGTGCTATCACAAATCTGTTATGAAGTGCACAAATAC
TCCTACCAAAATCTGTCTTGCTTGATGGGCGATGCTTGGTCAGAACTTCCGCAACAACTG
AAAAAGAAGACTTTTGCTCTTCGCCTTCTTGTACAGGAGCAGTCATCTTCTCTTCCATCT
CAGTCTGAAAGATAATGGATGCATAGAAATAGTTTGGATCCATGAGAAAGAAAGCAAAAT
AAGCACACAATAATGAGGAAAGCACCACCATCAGGTAATAGAGCAGGTAAATACTCTATT
CACATAAGTAAACTATGCACTACATGTGATGCTGAAGATGATTTGCACATTTTACTGGAC
ACGCTATTTCACCACTAAGAAAGAGTTCTGGGTATGAAACTTGCAGCAGTTATTCTGGAC
AAATTAAAGATACAAGAAGAAGTGATATTCACAAACATGACTCAGAGGTCTCCCAGGTCA
CAACCTGGCCATTAGCAAATCAAAAACTTCATTGCAGATTTTTGTGAAATCACAGCCAAA
ACCAAATTATCTTCTCTGCTATGTAATTACTACTTATAGTGGCTCATCCATCATTTTGGA
AATTATTTGGATTTTTTTTTCAACCCATCATAATCACAACAATATGGGCTACACTCTCAG
GATTAAGTTGTGCACTATCTTAGCCAACATTTTGGTGTTTCAGCATATGCACACGCTTAC
GAGCAAAATTGAACCCTGGAATACATAACTTACTTTAGAATTAATGATTGTAAGCATGGA
AAATACAAGCAGTGTTGTATACATGATTTTCCTCCCATATTCTCTAATGAAACACTTGAG
CAGAGGGGGAGATAAGCGAGAGAAGCCATCACCTTGGCAACAGGAGGAACCAAATTGAAA
CAAAATGAACATGCAATAGCTTCTCCTAGGACCCTTTCACACAAGCAGATTAGATGGGAG
AAAACTGCCTGCACAAACCGGATGCTCGAATCAGACCATGCGGGTCAGTTACACACATAC
ACCACAAAGTACCCAACACACATATAAAGATGCATATTATGATCATTCTATCCTATAAAA
CCTGGATTTAACATAGGTACCAGTGTAACACTATATCATATGACAAAAACTGCATGACCT
GCACATATACTACTATCAATAGGAGTCAAGTTACCAGGAACTGAATTATAGGAACTGCTA
GTGGTTCTGCTGCAGCATAAATCGGCTAGGCATCATCACTTGCTAAAGCAAAAATTGGAA
ATGTTGTAATAAATAATATATAGTATAATGTCATAACTACGAACCAAAAGGGTATCAAAT
TACAGATATGCATGACAGTTTACAAGACAAACATCTACAATATGGAGTATTAAGATGCAT
AATCCAATACTAGTAGGTAGAAGGCATGGCGGCACGCCGTGCCCGTATTGGGACCAATGC
ATACATGTAGGATGTTTCTTCTTCCTAATTTGAACTAAAAGGACGGATGCTAGTGGTACT
TTCATCGAGCTGGTCGTGTAGAAGTCCTTTTATGTTGTTACTTAGATTTGAATGTGCAAA
AGTGGAGAATAACTTTGGCATTCATTTGGTGATACAATCATTCAAAATTAGAAGTAGAAA
CAGAAGCTTATGCAGTTGCCGATCAACCGTAGCTAATGGACTATACAGTTCACTACTCCT
CACTTGTGATATATTAGGCTGAAAAACTGCAAGTTCAACTTTGCATCAACCGACCTTAAG
AGAATGAACTTATCAATCATTACTAAAATTATAGCTCTTGTTTACACGTAAGCGTACTTC
CATGGCGATGGCAGGCTGGTTATCCTCTATTTTCTTTGTACTTTTATATTGCCTAAATAC
CTGACTTTTTTTGTGATAGACTCATCCATTTCATGGCTTTTTTCAGTCAGGCTCTATGCC
TTCCCTCCAAAAATAGTGTAAATACCTGCAAGAAGGCAGCCTTTAATATATGGATGGATG
CCAGATCATGGAAGAATGCCTCAACAAGTGAACTGGCCATCGTTATAACTATATGTATGC
TGCAGATAAGTAGTTTGGAAGAACCTGTGCAGAAATCAACATAATTATGCTTTCACGTTG
CACAAAATGGCTACTCCCTTCTTCCAAGCGCCAATTACTTCTATCTATTTAATATAAAAG
CATACAAAATAAACTTTAGGTTTCCTTCTTTCATTTATAAATGTGTAAAAATATGATGAA
GCACACAATATTAACAAACACAGACTGCAGAAAGACCTTTGAAAACCAGAATTGCCAAAT
TATAACCACATAATCCATGGATAAATCATTAGAGTATAAAAAGAATATGGTTCTCACAGT
TTGCACTCCCCGGCAGCAGCAAGACCGAACCGAGATAATACACGAGGCTACAAATTCTTG
CTAGCTCATCACCAGTGTGTAATCTGGGACTATGCAAGCTCCTCCTACCTGCTATACAAA
TTAAATCCCAATTTTAGAAACTAACTAACTAAATGGTAGAGTCGTAGTTGGCTTATCTGG
TTAATACACTACTATATAATTAGCTGATACAGTGCTTGAGCTCTCAATCTAACTCTTTTC
TGTTGAGCATCCATGGATTCTTACATGATTGCATCTGGTAAAATAAATAGCATTCAACTA
CAAAAGTCGACGAAAACAGAATATTGAAGATGAACATTTTTAAACAGACTCTTTATTGTC
CCCCGATAACTATTGAGTTAAAGAACAACCTTTGATGACATTGGTTGGACATGCCGACGT
GTTAACTACTGTTGTCAAGATATATGATATACATACATGTTAAATAGGACAATATGCAAT
GATACATGTGAACCACATTTAATTTCTCACATCAATTTTTTTCCATTTCACACTTAAAGA
AATAATATAAACTCGTCATCGAGGACCATTTAGAATTGAGCCACCAAACAAATGCATCGC
ATAGCTCACAACAATTTCTTTAACTCGACACTTAAAGAAATAATATAAACTCATCATCAA
GGGCCATTTAGAATTGAGCCGCCAAACAAATGCATCGCATAGATCATATTAACACCCAAG
TCTACAGTTCGAAGGAAGTTGCATGCATCGGATGTATACATGCTAATCTAAGAACGCCAA
TTGCAGCGCCCAAGGGATACTATATATAGTTATCAAAACCCAAAAGTCATGAACCGCCGC
AATTACCAACCTTGTCTTCCGAAAATTATAGATGAACTGAAAACTCATGGGTCAACACAG
TGATGAGAAAAAAGGACAAACATTCAAGAAAAAATTCAGTGTTATGCTTAGATGGTTTTT
TCCTTCCTCAGTAGTATGGCAACTTGAGTTGTACCTTGCAATTAGAACAAACGTGTCCAA
ATCTTTTCTGTTTGATATGTGTAGATATACATACCTTGGTGGTATTGCTTCAGGTTTCTG
TTCTTCATATTATCCACCATAAGTCCGTAAAGGCGAACCCAATATTAATTAACCAAGGAA
AATAGAGAAACATAATTCACACAAAAGGGGTCATCTCAGATAAGCTCTTCAATCATCCTA
CTCCAAGGATTATCTATAAGTTTTTGGGCATATTGATCTCATATCTTGGATAGTTCACGT
TCACCCCTTTGTTGCAACAACATCTGGACATGATATATGTAATAACTTTCCCATGTGCAG
ATTGGTATAAAATTATAGCAAAGTCTAAACTCTAGATTTAGAACCTAAACTCATACAATA
ACAGGAATCCTTCACCATTTATTGTATGGATCACAGTAATACAGATAAGAAAACACCTTA
TTATCAGTCTTGTATCATAGATTCAACGGTAAAAGGATAGCCATTTCACTAATGAGGAAC
ATAATTACAGTTATCAATAAGATTGGGATTCTAAATTATTATGCACACTAACCTGAAAGT
CTTGCTTGGTTAAGAGATAGCCTTTGATCTCTCCTTTCTAAAAGTAAATTTATGCCAAGC
CAATTGATTTGAGAGCATCAACATACTTTCTTCTATGTAGATAGACTATTGCACGTGAAA
TTTTTTTAAAAGATATGCTTATACTTTGCACAACCAGATTATGTTTCTAAAATAGTAAAA
CCGGGGACTAAAAATTGGAAAATTAGTTGTACTTAAGAAACTAATGACCAGAAATTTGAT
TTCCCCTCCCACGCATAAAATGAACAACTAATCTGCCTTCAGAAGGCTAGGAACCACCCA
AATCAGCCAGGAACTCGCAGCCACTGCCAGGGCTAGGAACCACCCAAACCAGCCAACAAC
TAAGCCTGCCTCATACGCACCAATCCATCCATCTAGAACCACCAACGGGGTCGGCAGGAG
ACGAACGGAGTGCCATATCCACAGTTTAGCGCGCGCAGGAAACAGATCTAACGGGGTTGA
ACGCCCGCGCCCAGACGCGACCGTGGGGCGAAGGGGGTGGTCAGCGATGGGGCTTCGCGA
CAGACGAGCAGGGGGGCGTGGCCGGTGGTCGGTTGGTTGGTTACTTTGCCGTCGAAGAGG
AAGACCCCGACGAGGCCGACGTCGCCGACACTGCCCTAGATGACGACCGTGGAGGAGAGA
AGGGACCAGTTGCGGTAGATTATCATCTACCATGGCGTTGTCCCACCTCCTCTCCCGGTC
CTGGGGCATGGTTGTCGCGGCCCGGCTCAGATTTGGCCGTGGCCGGTCCTTGTTGGCTCG
ATCTGGGCCATGGGGAGGAGCAAGGTACGGAGGCCGGGGAAGGAGCAGCAGAGGAGGGAG
GCGAGGGGCGGAGGGAGAGGAGTCAGGGACTCGGGGTTGGTGGAGAAGCGGCCAGCGGCT
AGTTTGGGAACGGGGAGCATCCTCCGTCATCCCCGGGTAGAGCGGCGCGGAGGTGCCGCC
GGCCTCGAGGTCGAGGTCTGGGGCCTTAGGATACCCAAACATCGTGCCTCGCCTCGCCTG
GTCTGGCTCCCTCGCTAGCTGAGGTTTCGGTGGGGGGGGGAGAGGGGGAGAGGAAAAGGA
AGCAGATGGAGTTGGACATGGAGACGGCCCACCTCTCACTACAGGACGGAGGAAAAGGGT
GCGGGGGTTGTGCGAAAATTTTGGCCGTGTGCGCGGGGGTGGCGCGAGCAGTTTCAGGGA
AGTTTCGGGAGGAAAATTTCCCCTTTTTTTGATAAGAATTGGAGGGAAGTTTTGATAGTT
ATTTTTAATAGTTTTTATGCAAAATATTACAATCTTAAAATGTGAGCCTTTTTGACAGAC
CACAAACCAGC
