| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_170495
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_2675 |
3 |
1400 bp |
MLOC_2675.2 |
Available |
Available |
LOC_Os07g38000.1, FRAME:-2, EVALUE:4e-67, 13107.m03921 protein cytochrome c, putative, expressed |
| MLOC_25651 |
2 |
2606 bp |
MLOC_25651.1 |
Available |
Available |
LOC_Os04g22120.1, FRAME:-1, EVALUE:0.0, 13104.m02050 protein protein kinase, putative, expressed |
CDS Structure of MLOC_2675
CDS Structure of MLOC_25651
Contig Sequence (4651 bp)
>contig_170495 4651 assembly3_WGSMorex_rbca.fasta
TAATACAAGAGGTTCGGAGTTTGAACCCTACTTCATTCATGCATCTACCCTTTGAAGGTT
TAAAAAGAAGAAGAAAATGTGAGTTGGGACAGGATGCACTGGTGTTTGCACCAATTTGTG
TGACTCTACTCCATGTATAATGTATACATATACATCGGATGAAGAGCTTATTAACGGTCA
ACCATCATGTCCTTTACGACGCGAGTCGCTGATTAACAGCGCATGCCAGAGTACCGACCC
CTCCGAGGTGGGGCGAAGAAGAAACCCTAGCCGTCACCGCCAAGAGAACCAATCTTTCGG
CACCATTTTTCGGCGGCTCTCCTCCGATGGCGACCTCTTGATCACCAGTCGTGAGGGGGG
TTGCCGGATCCCACGAGTGTGGATCGCTTTTGCTTTAGGTTTAGGGACCTATTAGCTTAT
GCTTTGGGTCATTCAACGTCTTAGCATTGGTGGTGGCGACGGCGATGCTGAACAAAGAAG
CTCTGGATTCTAGGCGATCGTCTTTACAGTCGATGATGGATTTGGAAAACAGTCTGTTCA
AGCGAGGATATCGTGGCGGTGACGACATCCTTATTGTGGACCTGTGTCCTCAGGCTCTAC
CGTTTTGATGACGTCTGCTCCAGCATTAGCGCGTAGCTTGGGAGGTAGTCCACGAGCGGA
TGGAGATTGTGGTTTGCATCGACGACATCTGGAAGACGAAACATGTGCTCGGTTCTTGGT
TGATGGATGGCAGGTATGGTTTCCTCCATCGACGTCTTAGTCGTGGTGGGATGTCAGATC
TGGAGTTTGATGGCGCGTCCGGGGTGTTGCTCCGGTCCGATTCGTTCAACGATAATTGCT
TCATATTTGATGAGCCATCTTGTAGGTCCGCAAAGTTGTATATCGGCGATGGAGTCGCGC
CGAGCTCGGGTGAGGAGGTGATCCGTTAGTTTTTTCTTTGATGGGTGTCGTGGTGGTGCC
GAAGATAGATGACAGACGTTGGTGTCAAATTCAGCGATGTTCTTCTATCTTTTTAGTTTT
GTCATGTCGGTCTTCACGTGACTTTTAATTTGATCTTTATGATAGGAATGAGATACATAT
TACCATAAAAAGAAACATCATGTCCTTTCTTATATTATGAAATGGTATAGGTTAATCTGA
ACTATTTTTATGTACTCAAAAGTGTTTTTTTGGACAAATGCCACAAACACATACACATGA
CATCTGTCGGGAACAAGCCGGAGAGATAGGACACCAGAAAAATTACAGAAAAGACCCAAA
AAAGGGAAATCTTGCAATAATGCCCTTCCAAGACCCTGTAACCACCAAACTTGTGGTCAT
CAATCCCAATCACATCTGGCATTGACGCAGATGACGAAGACAAGTCTTGGGGATGCCAAG
AACCAAGGAAATGCCACAGCAGTGATGTTGCGTTGTGAGCCTCAAAACTGCCGCTGCCAT
GAGCGACGTCGCGCGCACACGCTGATGTGGGTGAACATTCCACAGTCCTTGGATCAAAAC
CGAATTCTGATTTCTGAAGTGTACGACTCACTGGTTGAAAACATCAAACCAGCTCCTCGC
TGACAGCCGCTGGCATGCTAGTATTTGAAGATTGCGTCGCCGTTGTACGGCTGTTCGACG
ACCCGACAGTGGTGGTGGTATCGCTGTACTCCATGGTGGAGGCTGCAAAAGGCTGAATGT
ACACGGCCACCGGCATCTTGGGCGGCAGCACCGGCATCCTGAACTTCCTTGACTGCAGCG
CCTCGACGGCCTGCCTGATCGCCGGCCTCATCTTGGGGTCGGGGTGCGCTGCCCACAGCC
CGACGGCCACCACCCTCTCAACCTCCCACCGGTCGAACACGCCGCCGAGATGCTCATCCG
CGGCGTCGAGGGCGGCGCCCCTGCCGTAGAGGTCCCACGCCCACTCCAGCAGCCGGAACA
CCTGGCCGTCCTTGGCACCGTCTCTGGGCGGCGCCATCGGCCGCCGCCCGCACACGATCT
CCAGCAGTGTGACGCCGAAGCTGTACATGTCGGACTCGGTGGACGCCTTGCCGGTGATGA
CGCACTCCGGGTCGAGGTAGCCCGGGGTGCCCGCCATGCCTGTCATTGTCTGCAAGCTCA
TGCCGTGGTCGATGAGCCGCGATAGGCCAAAGTCGCCTAGCTTGGTGTTGAAGGACTCGT
CCAGCATTATGTTGCTCGGCTTAATGTCACCGTGGACGACGCACTGATCCCATTCCTGGT
GGAGGTACAGCACGGCTGACGCCAATCCAAGAGTTATCTGGTATCTGATAATAACAAAAG
TAAAATCAGATCTGATCCAAGCACTCCGACTCAGTTTTGAACGACTATCGTGTGTAGTTA
GCCACTGTCCAGAATTTGGACTCAGGTAGAAACATATATGGTCCAAAATTATGCTCAGTT
TAGTCAAGATACGAAATCAAGTTAAGAATACGACTGACATGGACTGGAAGCATGCATACC
TAACTTGCCATGTCAGAACCTCTTCTTTGCTTTTGCTGTAGAGGTACCCATCGAGGCTGC
CGTTGTGCACGAGCTCGTAGACCAGCAGCAGCCGCCTGCGGCAATGGCACCAGCCGATGA
GCTGCACAAGATTCCGGTGGCGCAGTCTGCTGATGATAGTGACCTCCGACCTGTACTCCT
TCCTCCCCTCCGAGGACGCCCCTCGCGAGAACACCTTGATGGCGACGTCGCGGCCGCCGA
GCTCTTTCATGTGGCCACGGTACACCGACCCCGACCCGCCCTGCCCCAGTTTCCCTTCCT
CCGCGAAGTTCCTCGTCGCCGCCGCTAGGTTGGCGTACGGGATGGGCCGGGGTCCCGCGC
TGGAACCGAACTCATCGTCGTCCATGTCGAGGGAGTCCGGAGTCATATCGCCGGCAAGCA
TCATGTCCTTGTCGTCCGGTTGCCCGTTTCTCCTGCTTGCACGCCGGAGCAGCACCGCGA
CTGTGACGCCGAGCAGGAGCACCAGCACGGCTGCGGCGGCAACCCCGGCAATGAGCTTGG
TTGACCAGGTAGACGGGAGGGGCGTGCTTGTGGTCACCGTCGGGAGCGTGGACTGGAAGG
AGCACGAGAGTACCGTGTGATTGCTGCCGAACGCTGCGCCGGTGGCCGCCGAGAAGCCTA
TAGAGACCTGATCCGGCAGCAAGCTCCGCAGGTCGATGGTGGCGGACAGGTTGTAAGTGG
TGTCACCGACGCTGAGGACGACGTCCAGCCTCGTCGTGGAGTTGTCGTACTTCACCGTGG
AAGACATGACGCCGGCGTCGACGAGGCTGTCGTCGGGCAAGATCAAGAAGTTGCCGCGTG
AGTCGATGCTGTTGACGTCTACGCCGATGTGCCGGCTGCTCGGGTCCCACGGGTCACGGT
GGGTGTCGAACTCGACGGCGACGAATCTGGCGCTGCCGGACGCGCTCGCCATATTCGCCG
TCTCGTCGAAGAGCCCAAGGCAGCCTTCATAGGACTCCTGCGGCATCTCGGGCATGTACG
GTGCGAGGAAGAACGCCATGCCGTGTCCAGGGCCGCCTTTCCCGCCATCCAAAGATTGGA
TGGTGAAGTTGAAGCTGGCGGTGAAGCTGGCCGCCTCGCCCGTGGCGTCCCAGAGCTGCA
CCGGCTGCTTGTACAGAACGCGGCCCCTTGCTCGGCAGCCTGGAAAATTCTTGTCGCCGA
GGAGGTCAATCCTGCCGTCGGTGATCCTCGCGTCGTCCTCCGCTCTGAAATCGCCGGGGC
TGAAGGAGACAGCGGCGGCATGGTGGACGAGCATGAGGCACAAGCAGAGCTTCAGCACAG
CCATTGCTGTAGCTCTGAGTTCTGATGAGGATTGAGACCGGCACAATAGTAGCGCCGGTG
CTAATAACATGCCCGCTTTCTAGCTGTGCGATGAAAACACGTTGAGCACGGCGAGCCACT
AGGGTACGTTTTCCAAACTACGAGTAGATGGCATGGAATTCTGCAGCACTGTAAGCGACA
TCTTTGTTTCATTGTAGTCGCGGCGTCGTCCCATATCCTTCCGTCACGTCGACTGGACCG
GCCGATCGGCTTCATCCGAGCAAGTTTCTACTCAGAGTCAAATTCCGTCTTTGTTGTTAG
GCCAGCCCCTGTCGTCGAGTACTTTTCGACCACACGCGAGGCGACCACGAAAACAACTGG
TGTTGATGTGGATGTGATCCCGACGAAGCTCGTACCACACTGCCATGGTAGCAAACGCAC
TTCTAGCCCGAACAGGACGGCCATTCGACACTAGCAGCACGCCAACACTTGGATTGAATG
AGATAGCCACAGGGGCTTGGACGACGTCAAAAAACCAAATGTAGCAGGAAAGATAGGTTA
ACTATATGAAAATGTAATCTAAAGAAATAAAAATGAATCTAAGATGAGTTATGATCTAAC
TAAGCTAATTCGCGATGGATATTGTATGCAAAGTCGGTCCTCCTATTTCGCGACCTACAA
CGGCAACACACAGATTTGGGACGCCGTCAGCGGCTAGAGGGTCGTAAGAGCATCTCCAAC
AGACGCGCTTCGCGCTACGCCTAAAAAACGAGTTTGCCGCGCGCTGGTCGTCTGGTTTTG
CGCGTCGCGCAGCGCTGGCTCCAACAGCCGCGCTATAATGCACAGCGCGCGCGCCGCTCC
AGCAGTGTCCAAAAATGCAGCGCGCGCACAA
