Contig Data
morexGenes
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Map Locations of contig_169593 (3665 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_169593

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_25499 8 1152 bp MLOC_25499.5 Available Available None
MLOC_25501 1 340 bp None Available Available None
MLOC_25500 5 1141 bp None Available Available None





CDS Structure of MLOC_25499






CDS Structure of MLOC_25501






CDS Structure of MLOC_25500






Contig Sequence (3665 bp)

>contig_169593 3665 assembly3_WGSMorex_rbca.fasta
TGCCACATGAAAAAAATCAACTAAATTTACCCAGTCAATCTTCCTGAGCAATTTTTCAAA
GTTTTTGTTCAGATAGAAGCTTTGTGAGGGAAGTACCAGCTAGTTTATCGAAATGAGTTT
TAGATTTTCAAGAACCTTCATATGTTCAAATCATCCCTTTACTCCAAATTTCATCTCCAT
ACCACAAACGAGGTGAGCACACCTTCAAATCTTTGTTTCTGGTAATCTTTCCAGTTTGTG
AAGAAACGACATTTTGTATTGCTTCATAATTGCTGAACATTTACCAGGACATGCTCCTAA
ATTTAGAACCTCGCTCACTACAGGAATCAGCTTCTTTGTCGTCCGTCATAAGAGACGGCA
AAGAGGACCACACCAACGGCAAAGCACTATAAGAAATATGCTCATCTATGACAATTTTTT
TGACCACGCTCAAGTTAGTCATAGATCCATGACTAAATTTTGCCAAATGGTCATGAAGGC
TCATAGACGGTCCATAACCTTGAACTGTATGACCATTTACGTCCATTAGGTCATAATCTC
ATGGCCCTAAATGGTCATTAAAATATTTAACATTGGCTAAGGCATCATTGTGGCCTATTC
TGACCAAATTGTATGGTCATAGTCTTGAATGCAGGTGACTGGGCAGACACCTCAGCGGTA
CTTTTTTCTACGTGTCAGGGCTACGTGTCAATTCTGCCCATTTGTCGAAGATAACTAGAT
ATACATTCTAGCTGACTCGTAGGTCCCACATCAGATCAATATGACATGTGGGGCCCACTA
ACCAACCCATGCTCGCTAACCATACATGACATGTAGGACCGAGGACACTCGTGGCCGCTA
ATATGTAGATGGAACTTAGATACAAACAGAAATACAATAAAGAGGGGTCTAATATTTGGT
TATGGGAAGACTTCATTTTATTTCTTGTTTTACGTGATGTATTATATCGTGAGAAAATAT
AATTTGAGAGTTTTTTCAAAAAACAAGTTTGAAATGAAAAAATAGTGTTGGTATGTAGGT
TGTTCAAAAAATTATTCTCTACCAAAGATGCACACACGAGATACAAGTTCTATTTAAAAA
CATAAATGAATAAATTATGTTAATTCTAACACTAGTAACTTTAAAAAAATTGTTGGCATT
AATGATTAGTGTAAATGGGCGAAATTCGGGCCTTTGTGGGCGGGAGTAAAATTTTGCACG
CCCGCACTTTTTTTCGAGATTGAACGCCCGCACTTTTTACCTCCAATCTTGGCATAATAT
TTTCACTTCGCGTTCTGGAGGAAAAGCCCAATAAGCAAACCCATTATCCATTATCTTTTC
GATCCCTAACCCTAGGCACATCCACATCCTCCTCCATCCCGCCGCCGCACTCTTCCTTTC
TCTCCTCCATCGCGCCGCCGCCCCTACCACTCTTCCATCGCCCCAATCAACGACTCATTC
ATCCCCTTCCACATCCCTACCTCCTGCAGGAGCGAGCAACAAGTTTGTTGCCCTGCTGTC
CTCTCCTGTTCTCCCGATTGGTGTAGCAAGAGCTAAGTATGCGGTTCATGGCTACGACGG
TTGCGAACGCAGATCGAACGTGCACCTGCATCAGCGTCAAAGGTACCTCGCTCATGGTGC
GTACTCATTGACCTCCTCTTGTCCAGCCCCTCTCGCTTGATCTCAAATATTCATGTCTCC
CAGATCTAATCCACTGCATCGAGGACGTGCATGTTGATTGTCGCTGCCGGCAACCGCGCC
TCAAGTGGACCTACCAGGCGTTCACGGGGCAGCCATGTCATCACGCGGCGGCGCCTAGGT
CCTCCACCACATGTCGATGACGTTAAGTCTTTGCCCTACAGGTCGACGATAGGGCGCGTC
TTGGGCAATTCGCAGCGCAGGACGTCGTCGCGGTCAGGTTCGAGTGGAGAACAGTGGTAC
AACGCGACGCACTACTATCTCCTTCCCGAACATGGCTCGGCCAGATCTGGTCGCTAATGG
CCAAAGTTTTACCCCTCTCTCTTAGTATATTATAATATCCATTAATCTGATTTACCAATC
TGGTTCCCCGTGTCCTCGTGTATGCATGCATGGCAGTTTGTCCCGAACTAGATGTGGTGG
TGGGAGAACTAGTCCGATGCACGAAAACCATGATGTTGCACCGCTGCTAGCGAAGTCGCC
ACACTGACTTACCAAGACTACAGGGTCTCCACCACACAATCCAAATTCTGCTGATCCAAC
GTTCTCGGTTGAATTTGGCATGTGAGTACTTTTGACTCCCCTGCTCTCTTCTTACTTCCT
TGTGGTGAGCGTTCTTACGGGTGTGGCATGGTGATGTGTTTGATGTGGTGGTGTATGATC
ATGCACTAGCGGATTCCTAGCAATATATACCTATATAAACCAAAGGAAAGTGACCAAACT
AGTAATTATATGTCTACACGCCACCAGCATACTAGTTATGTACTTAATCTGTTTTGGATT
GTATAAACAAAGGTTTGCTACTTTGACTCGTTGTACAACATTAATTCCCATTGCAGAATA
TACATCTATTTTGGATTTTTGATATAAATATTATTAAATGTGGTGTTATGCCCGTGAAAT
AAGGTCTTGATCATTCATTTTCGCCATCTCCAAATCTGTTGTGAATGACATAAATTTCTG
ATTGTTTTAACCATGAATTCAATACCAAAGATACTTATTTTATGTAACTCCCCCTAGGTA
AATATGATATGATACTTTAACATCGGACAACAACTTAGCAACTAGCCTAATTGTATCCAT
TAATGATGTGTTCATATATTAATTTTACCCTCTTGTATGCTTAATTTTACTTTACTATGA
CCAATGTTTTTTGTTGGTAGTAAATAAATTAGTGATCACCGGCAAAAAGAATTGGCTGAA
CAACTGAGCGTACATAGTATGCTCATTTGAGTCATTTTCAGGTTATGTGTGTGCTTGCAA
ATTGTAATGTAGTTCTATGTTGTATGTTATTGTTGGGCTGCAGATTTGCAAATATGTGAA
TATTACAATCCTCTTCATATTTTCGATGACGTTGCAGAGTATACTTCATTCAGATTTTTG
CATTCACCTCATGTCATGTAGATTAGACTTCAAAGAGTGTCATCGATTTCCCTATTTTCT
TGAATAATAATGGTATTGCTGACCTTTGTCAGCAGCGTGCCACCAGTAGCACTTCAACAT
ATTATTCGGGGATTGGAGGATCAGAAATGTTACTATTTTCCTGCAATCAATATTTTATGC
AACTAAGTTACACCTGTGCAGGTGCTTTTACCGAAACAATGCTACTCAGGCACAACTATA
AATCTGGTTCTTGCATTGATTCCAGGTTAGCCTTGATGGATTGACTCACTTCAGTTGTCT
TTCTGAGAATCCACAGGTAAATCTCCAGCAGCGACCATGCATGCAAACTTTGAATGTAAT
CACTTCCTAATTAGCAAAGCATGGAGCAGTTGTCACTCACTTGTTTGAAATCCTCTCTTG
TCAACCACTACTAACACACCATGTATATTTTATACTGAGTTGCATGACATTTTTTAACAA
TTTTCTACACACTGATTTCTGTACAAGCTGGTTATTCTGTTCGATATGTGGGTTACCAGT
GCTTAAAGTTAGGAAAAAGGCTTAGTTATTGATGGTTGGTAATATAAAAAAGGCATCCCT
CGTTA