morexGenes - Barley RNA-seq Database

Contig contig_168861

Source Contig contig_168861

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_168861 (1588 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_168861

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_25391	1	503 bp	MLOC_25391.1	Available	Available	None
MLOC_25390	1	1155 bp	MLOC_25390.1	Available	Available	None

CDS Structure of MLOC_25391

CDS Structure of MLOC_25390

Contig Sequence (1588 bp)

>contig_168861 1588 assembly3_WGSMorex_rbca.fasta
TGTACGTCCGCCGTTCCTAAATATAAATCTTTTTAGACATTCCAATAAAGGATTACATAC
GAAGTAAAATGAATGAACCTACCCTCTAAAATATGTCTATATACATCCGTATGTAGTTCC
CTATTAGAATGTCTAAAAAGACTTAATTATATTTAGGAACAGAGGAGTAGAAGGCTGTTG
CATGTGGTTTTTTGAAGAGTTGCACTTGCTGTCAAAGTTTGACGAGTATTGTTCGCTCAC
GAATGAACGATGGCGCTTGTGCTTCCTTCTATATATATATACATGATGAGGGAACTCGAC
ATTGTCTGAGGGTTGGCGTGCCATTCTTTTCCGGCGACTTAATCATATGTCCTGCACGCA
TGTGAAATCTTACTACTTTATTGTCCAATCATCATTGGTGAGTAATTGATTGATTGCCGT
GAAAAAGAGAGTAATTGGTCGATCTTCTTTCCTGATCCCCCTCCATGTTTTCCAAGTGTC
TTTTTCCTTCATGGCTGGTTAGATTTTTCGTTAGTGAGTTGTTGACAGACGTATAGCAGT
ACTGCAAAGTTTTGTGAAAATTGGCTTCGAAAGAGAACATGTGCCAATATAAACTCCAAA
TTCATTGTTTCCGCTTGATTGATAAACTGTTGATTTTCTCAAGAAATATACCGCACAAAA
TCCTGCCAATATAGCAGGATCCATGGGTGCATCACTCTTGCAGGACCTTGGGGTTTGGTT
TCAGTTGCTGTATGTCTGAAGGGGTATGGAATGGAAGTGGCACCTGTAAATAGGCAAGTG
CGAGTTCCAGTACAGCCTTTGTTGCATTTTTGTCTACATATCCTGGTGGCTTGTTGAGCT
GATAATGTTTAAGAAAAAGAGAAAACAGGGAAAACACAACATACTCATTTACTTGTTATG
TTGAGAAACAAGCTAATAAGGAAATGGGAAAAGTAGTATTTGTTGCATCGAACATGCTTT
TCAGCTCCGATTCGTGCACAATACGAGAAGCAACAATATCCCCTGAGAGCTTACTTCTTA
TCTCCTTTAGCTTTTCCCTGCATCTTTTCTTCCCGCTTATTAGCTTGTGCATAGTTTTTC
CTACTAGCTGAGTACATGACTGTTGGTGCCGCCTCCTTGCAGCGCCGCTTCTTCTTCCTC
CTCGAGCTGCCTCTCATAGTTCTCTCTCTATCTCTCTGGTTGTTTCTCTCAAACACACAA
GGACACACTCACGCAGGGGAAAGACTCAACAGATACACGCACACGCCAAGGGAGAAACCA
GCCACTAGCTTTGCCGGAGGCTCTCCTCCTTGGTGACACAAACACTACATTTTGCTCTCA
GCCCTCACGGCCTCGCAGCCGAATACACTTTATATAGCAGACCCACGCACACAAGCCAGT
GGCCACACTCACCACTACCTCACGCACGCTTGCACCACACGGGCCACTACCACATGACGC
GGCCACTAACCAGCTAACTAGCCTACATGCATGCACTAACAGACTAGGCATTTATCATAA
CAACCTCAACGAAAAGACACTTTTGTAGCTAACTCAACGTAGTGCTCGTGGAGCTTCCTT
GATTTTTAGAAAAGGAGGCGTTGCCCCG