Contig Data
morexGenes
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Map Locations of contig_168363 (3089 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_168363

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_25313 10 1064 bp MLOC_25313.8 Available Available LOC_Os08g31460.1, FRAME:+2, EVALUE:5e-20, 13108.m03262 protein GTPase of unknown function domain containing protein, putative, expressed
MLOC_25314 2 1261 bp MLOC_25314.2 Available Available LOC_Os11g46210.1, FRAME:-3, EVALUE:2e-123, 13111.m04625 protein NB-ARC domain containing protein, expressed





CDS Structure of MLOC_25313






CDS Structure of MLOC_25314






Contig Sequence (3089 bp)

>contig_168363 3089 assembly3_WGSMorex_rbca.fasta
CCCTTCCCCCGCGTTCCCGCCGCGGCACCCCTCCCTGTCACGGCGTCGCGCCGTCGCGCT
CCCGGACTCGTCGCCGCGGCCGCTCCGGGACAACCGCGCCAGGCTCTCCGACAGGCACTG
CCACTGGATCCTGCAGTCGCTGGGCCATGCCGTGCACATCATCGCGCCCGACGGCAAGCT
CCTCTACTGGTGAGGTCCCATCCGTACCGCCTCGGTATCTCGTGCGTCCTCCGTGTTCAC
CAGGCGTTTGGTGAAATGCCGAACCAGTGTCGTGCGTGCGCTCGAGTATGATCTCTGGGG
CTTCTGGTTATTTCTGGTCGTCTGCAAGTTTGCCCACTGGGTGAAATTTTACTGCTGCGA
CCTATACTATACGGGGCCTAAAATGTTAGCTCAGAACTGTAGTTTCAGCTGCGTAATAAA
CCTCTTGTGATGTTACAAGGGTGTAATGGCCTTTCCCTTGGTGTTGCACTTAAATAGTCC
TGTGTTGATTAGCATTCTGTGGTAGATGAAACTATTTTTTTTCGAATGTTGTGGTCGAGG
AAACTATGGGTTTACTGGGGGGAAAGCCGTTGCTGAATTCACAACTAGTTGATGTCCAGC
CTCTAGCTTGTCCTGGTCAGCACACTGGGGTGTTCAGTTATAATGGTGGATACTTATCAG
GATTTTTTTTCGTCTTAAGGGATATTAATTACTAGTATCAGTTATAATGGTGGATACTCG
AGTTTCCCAATGTTGGATGGAAGTTTGGTAATCCCTGTTCTTCGGAGGCCCAAATACTTG
AGTACAAGCATTTTACATATGTCTTTGAAATGTTTCTCCTTCAAACCATTCCAACCCTCA
AGATCAAGCACCTGTATTATTGCATCATTGAAACACTGAAAGGGCAGTTGGTGTAGGCTC
CCAAATACGGTCACTGATCACACCTCAGATAAGTTCATGCCTCTCGTAGAATTTATAAGC
TTGGAACACTGCTTTGTATGGAAAGCCGACGCACTTTATTGCTAGGCGCTGGCAACAACC
AGTGGCCACCAACCACAGTGATAAAATTCTCTTCCCTCGCCTTCAACACAATATATTCAA
GAACCATATCATGCACTTGGAAGGTTTTTACCTTCCCATTGCTACTGTGCTCCACAGGCC
TTATTATCTTCCTTCTTATTAGCTGATTAAAGTATGTTTCTGCAACTTCCTCCTCATTGA
GTCCTTGCTTTTCGCTAGAGAAACCTTCTGCTATCCATCGGCGGGTCAAACGTTTCATAC
TGATTTTCCCACCCTTCGGAAATATGGTCAAATAAAGTGAGCAGGTCTTGAGATCTGGTG
GCAAATCATTGTAGCAATGATCGAGTATTCTTGTTACCCCTGTTAGGGTAAGAGAAGCCA
CTGGCTCTGAAAATAATTTGTCGCAAACTTTTCTCCAATCGTCCTTGGATTTGCTTGGGT
TGCAGGCAACAAGACCAGATATGGTCACAATGGCCAAAGGCAATCCTCCGCATATTTTCC
ATATCTCCTCAGGGACGTCCACCTGTACTCTGTCGCTGCCTTTGCTGCTTTTGCATTCAC
AAACACTTTCATTGAACAATGTTTTGGGGTCATTACCACTGAGAATATCGACTGTGTGCA
GCAGATCACGTTCATTTCTTGGGAAGCATGTCTCGCCAACAACGTGAAATCTTGTAGTCA
CTATTATTCTACTGCGTTCTACATTTTGAACAGGCAAACAAATTCTGACACTCTCCCATG
TTTTAGCAGACCATATGTCATCAATAAAGAGGAGATACCTGCCAAGGATAAGATAGAAAA
TACACGTGACAAAAAAAAACGCACACATGCGTAAGGAATAAGTTTATCTGTTGTGTGTAA
GGAATAAGTTTATCTGTTATGTGGACAGGGCAGCAGAGCTTGTTCTTTGCGCTGCCAGTG
CCCGGACAGGTGCCAGCATTTGGCACTCCTTGATCGCCATTCACTCATTGCCCATTGCAT
CTGCCCACTGACAATTAGTACTGGATGGAGTACTACATCACTGTACCTCATTAACCATCC
TCTGCGTTTTTATCGCCCTGTCGAATGAATCACACAAAGAGGCTACATACTAACCATGGT
TGCGTTGGTTTCTGCAGGCTACGGCTCGTGTGTCTTCACCAGAGGCCAATTATGCATGCA
ACTTAAAAGATTCTTCCGGCCGTGATGGTGCGGTGAGCGCCATGATTGGATCGAATCATC
ATCGAGTAAAGCCACGAAACAGTGGGCGGTGGTTGTGCGTGGGATGCATTCCTCCCCCTT
GTAAAGCCACGAAACAGTGGGCGAGTAAATTTGCATCTATTGTGCAGGACTTGTTTTTTC
TCCCCCTTGTACACGCCGATAACAAGTTCCTGACGCAGACACTACTTGAAACCCTTTTGC
ATTGTGAAGTTTAACTTCATCAGCTCCAGTTTCTTTGGGTAGCACAATATAGATGTTTTT
TGAATAATAAGTAGGTTCTCCAATCTGAATTATATGTATCCTCTATTGTAGGGAGGCTTG
TCTACTCTAGTGAAATCTTTGAGATCAAGGTGCATAGAATTGATCACTGAAATTGAGGCT
CGTTTAGATTTTGAAGACGAGATGCCTCAATTGGACCCTTTGATGCTGCTCAGCAAAATT
AACAGCATGAGGCAATAGGTTCAAGATGCTCTTGATACTGCAAAGTATGATAAGCTGTTG
TTGTCTTGTCTACAGGTACTTTATTCTATGCATTATACTGAATTGTTAAAGGTAAATTAA
TTAAGAATGAAAATGCGCTTACAATTTTGCACAGATAGCAATTATTGGCCGCCCAAATGT
TGGAAAGTCAAGCCTCCTGAATGCCTGGAGTAAGGTATAATCATGGATATCTCTCTGTCA
TTATTTTTGTTGAATATTGGTCCAGCATATCTTTGTTAGTGTTCTATTTCGTTATTACCA
TGCTTGTTAATCTTTGTTGTTTTCTCTTTTTATATGTGAAGTTACATGAGCTATATCTTA
TTGTTATGGGTTCAAGGCTACTTAAGGCATGGGGTCATTAACCAGCACACAAGGCAGCAT
GAAGGCAACTCTCTTAAAAATAGATTAGT