Contig Data
morexGenes
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Map Locations of contig_168295 (4613 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_168295

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_25299 1 1965 bp MLOC_25299.1 Available Available LOC_Os03g10190.1, FRAME:+1, EVALUE:0.0, 13103.m01136 protein seryl-tRNA synthetase, putative, expressed





CDS Structure of MLOC_25299






Contig Sequence (4613 bp)

>contig_168295 4613 assembly3_WGSMorex_rbca.fasta
GTACATCTAGTACGCTTTGTGTGTTGATCATCTTGATTTACTCTTTGTCTGAGATCTTGA
TCAACCATGTGGCTCGATGACCATTCTTTGGATAATACNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAACAGATGGACTTCAAGAAGTGTTTATGAACAAATCCTATA
AATATAACTTAAGACAACCATTAGTCCATAGAAATTGTCNNNNNNNNNNNNNNNNNNNNN
TGGAGATATATGCTCTAACAGTAACCCAACTTTCCTTACAACACCTTTCTTGAAGTCAAA
AGAAATACTTCCTCCGTTCCCAAATAAGTGTTGTAAATTTTGTATAATTTTTTTAGTAGA
TCAATCGACATGAACACTTGTTTGAATGACCAAAACATTCCTTATTCAAAAATAAAAGTA
AAGAAAAAACAGAAAACAAGGCAAAATAAAAACAGCTCGCGGCGCTGTAACGGGCCGGCA
GGCAACTGTAGCAGCGCCCCTTTGCCGCATTGGTCTCGATCGCTCCCTCCCTCCCTCCTT
CCCTGTCATCCGTCTCTCGTCAGAAGAACCCTCCCAGTCTCCGCCTTCCGCCGCCGCCGC
CACTCGCAGCGCAGCCGCCTCGGCCCCGTCGAGCTCGTCCGCGGAGAAGGTGGCCTAGCC
GCGGCCGCACGAGAAGATGCTCGACATCAACCTCTTCCGCAAGGAGAAGGGCGGCGACCC
TGAGCTCGTCCGCCAGTCGCAGCGCAGCCGCTTCGCCCCCGTCGAGCTCGTCGACGAGGT
CATCGTCCTCGACGAGGCCTGGCGCCAGAGTAAGACCTGCTCCTCTCCCCCCCAGGATCT
TCCAGATCCGCGGACCCTGACCCCCAGGACGTATCGTCTCCGCAGGGCAGTTCGAGCTCG
ACAAGATCCGGCAGGAGCTCAACAAAACCAGCAAGGAGATCGGCAAGCTCAAGGCCGTAC
GTCCCGCGTCGATTTGCTCTGCTTCGGTTTCTTTTTCAGTCCTCGGCGGGGGGCTCTGGA
TTTGTATGTGACGGCGGGCATGTCGCTTTGCAGAAAAAGCAGGATGCGACGGAGCTGATA
CAGAGCACGGAGGAGATTAAGAAGAGGCTGGCCGCCAAGGAGACTGAGGTGCAGGAGGCC
AAGACCACCCTCGATGTCAAGCTCGTTACCATCGGCAACCTTGTGCATGAATCTGTGCCC
ATCAGCAACGACGAGGTGCGTTGGAAGTGCCAACCCCACATTTCGTGGTTCTACAGATAA
CCAAGGCAACATTGGTTTTATGACTTTGTGAAAGATACCAGTAGTCTTTTTTAGGGATTG
TTTGGAACTGCTAGCTGTAATATAACTTATTTCTCGTTCCCCTGTTTCTGCTGTCAGTAT
TCCCATTGCAATTTAGGTAACTATAGTAATACAAAAAACATCACTGCATTGCATTGAGTT
GGGTTTGAATCTGCTTGTGAGCAACAGGATGTGCCTACTCTTGAAATATGAAATATAGAT
TTGCTTCACAGAACTGATATAGAGACATCTCAAGTTGCTTATTAGTTTCTTCTCACAGGC
GAACAATGCTATTGTGCGGACATGGGGAGAGAAAAGATTGGAGGAGAACTTGAAGAATCA
TGTGGATCTTTGCATAATGCTTGACATCGTATCTTTGGATAAGGGTAAATGCTCAAAAAC
AATCCTCTGTTGGGCAAATGTTTTCTCATTGTGCTGTGATTAGTTTGGTTCAAGTTTAAT
TGAAAGTTGAATGCTTTTTTTTTACCTGCCTACAGTTATCATAATAAATTGCTTCTTTTG
TTGTGTAGCTTGCTGCCATTCTAGAATGGCTGTCTGTGATTCTGTTCTACCTCTCTGCGA
CACAACAAATTTTTGTTCCGAACTTTAGGAGAACTAGCTTACCGACAAATATAGGTTTTT
TCTTGAGGAATTTTTAATAATCAGCATAGCTCTACAATTTGTATGTGTCTTACGCTAAAC
ACATACCAATAATATTCTGTGTATTTGACTGAAATTTCTGGTTTCAACTAGCACTGCTGT
ATGCATCTGAAATTTCTGGTTTTAAGTAGCACTGTTGATTCTGTTGTGTTAGCATGTTGG
CCCCGGTACTTGGTATCGCACATATCATTATCCAATTGATGTGCTTGATACGTATATGGG
ATGTGATTGATTTTCTATCCCTGTATTCCTCTGTCTACCATGTTAAGGAACACAAGATCA
TCAAATATAGTAGCAGAATAGTAACAAATTCTTATGTTTCCATCTACTTGCACTACCTTT
AAGCTTATGGAAAACCATTCTTCATTCAAACTTATGAAGTTTTTTTTTCCTGTGATAGCA
CAAGCTCGCTGGAGTTACTCAATTTGCGGAACCCTTGCTTTATTAAATTTTAAGCCATCC
CTCATACTTTGCCCACTCGTTCGCAGGTGCTGATGTCGCTGGTGGAAGAGGTTTCTTTTT
GAAAGGCGACGGTGTCCTCCTGAACCAGGCGTTGATAAATTTTGGGCTATCATTCCTGAG
AAAACGAGACTTTACACCAATGCAAACTCCTTTTTTCATGAGAAAGGAAATCATGGCAAA
ATGTGCCCAGTTGGCCCAATTTGATGAGGAGCTCTACAAAGTAAGTCCGAAGAGGCGTCC
TTCGCATATTCTGGTGTTATTGAGCAACTGTATTTTCATTTGTTTCTTTATTTAAAAATA
AGGCCGTGCTTTCTCAGGGTGTGGTAATGTATTTTCTTGCTAGTTAGCCGTTGTATGTTC
ACAGCATCAGTAAGCATCACCCAGTTTTGTTGAAGTTACATTCTGTTAGGTTGATTGGTA
ATGGTTCTCAGACCAGTAACCTTCCAATTCCAGTTCTAACTATCTGGCAAGCCTTAACAT
TTGCAGTTCTGGGGAAAGTTCGAAACACCATTTTTTTGTTTATATTATGTTATTAGTACA
CTGGTTCCTCATGATCATTGTTGATTTGAACTAATGATGTTTCGGTAGTATTATTTGATC
CAACATGTGTAATAATATGTCCATGACCATTAGTTGCATTTGGCAGGTAACAGGTGACGG
AGAGGATAAGTATCTCATAGCAACATCGGAGCAACCGCTATGTGCTTATCATCTAGGTGA
TCGAATTTATCCTGCAGATTTGCCGATCAGGTGGGTAGTGCCTAATTTTATGTAGATTGT
CTTTAGTCAGTCGACGCAAGTAATCTGATAACAAACATTGCCTGTTTAGATATGCTGGGT
TCTCCACGTGCTTCCGGAAAGAAGCTGGTTCACACGGGAGGGACACAGCTGGCATCTTCA
GAGTCCACCAGTTTGAAAAGATCGAGCAGTTCTGTGCCACAAATCCAAATGACAACGTAT
CCTGGGAAATGCATGAGGAGATGATTAAAAATGCAGAAGATTTTTATCAGGCGGTAAGTA
CCCGAAGCTTTGCGAACCTTAAACAACACAGTGTTGATATCCTTGACTGCGTGCTGCTGA
TATGTATGAACATTGCTTGCAGATTGGGCTACCATATCAACTAGTGTCGATTGTCTCTGG
TGCTCTTAATGATGCTGCAGCTAAGAAGTATGATTTGGAAGCATGGTTCCCTGCATCAAA
AACCTTCAGAGAACTAGTATCCTGTTCAAATTGCACTGATTATCAGGCAAGGAGACTTGG
AATAGGCTATGGCCAGAAAAAGGTAGTTTTATTTTTGTTTAGATTGATGGATACTGGTAG
ACGACTCTGCTTACTTGTGTCTCGAAATGTCTGACCACTGATGTATTTCTGTTGAAATCG
CAGAATGATGAGCAATCCAAGCAGTTTGTTCATATGCTGAACTCTACGCTGACTGCAACT
GAGAGGACCCTATGCTGTATTCTGGAGAACTACCAGCGGGAGGGTGGTGTTGAGGTGCCA
GTGGTGTTGCGGCCATTCATGCTTGGAATAGATTTCCTTCCTTTCAAGCGGCCTCTTGAT
AGCAAACAAGCTGCTGCTGACTCCAAGCCCAACAAGTCTAAACCAAAGGTATATTTTTTC
TTTTTCAGTTTCCGAAGGCAGCATGTTAGTCCACCCACCAACCTGATCATTTATTTTGTC
TCCTGGCAGGGAAATGCGGCTTGAGCTGCAAGAGGAGTGAACTGAAAATTGTTTCCAGGC
AGATAATGATGCATCCTTCCTTTTTATTAATTTCTGAGTCGTCTGTAGCATGATGATGAT
TTGGTGTCCCATTTTGGATGTTTTGGTTACAAAGTATTGCAATCAAGGACACTATTTACT
GCAAAGTGTATTAGTGTTTTTCATGACTATACATCCGTTGCATTAACTAATCGTCTATAT
AGAGATTAAAGTAGCGACAACTTTATTTATTTTGTTATTTCAAGCTGACGTGTAAATCAC
TCGTTACCTGAGTGGCAGTGGTACGTGTGGGGGCAGAGATGAAGATGCTGAGATCACATG
AGCCCTCAGCTCGAGATGTTTATTGCCTGGTCTTCAATTAAAGGTGCCGATGGTTGATAA
TACTCCCTCCGGTCCTTTTTAGTCTGCATATAAGTTTTGTCTGAAGTCAAAGTATCTTCA
CTTTGACCAAACTTATAGAAAAAATCATCAACATTCACCATGCCAAATCAATA